Gene
| Gene Model ID | pfu_aug1.0_7496.1_31399 |
|---|---|
| Locus | scaffold7496.1 : 50654 ... 57195 : - |
| To GenomeBrowser | scaffold7496.1:50654..57195 |
| Genes list of scaffold | scaffold7496.1 |
| Synonym | pfu_aug2.0_798.1_27796 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_7496.1_31399.t1 | 1 | 1 | PIG-F | 3 | 89 | 4.9e-30 | 104.8 | 1.5e-33 | 5.5e-30 | 104.7 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_7496.1_31399.t1 | gi|149727597|ref|XP_001498846.1| | PREDICTED: phosphatidylinositol-glycan biosynthesis class F protein isoform X1 [Equus caballus] | 8.0e-21 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 2 |
| egg-4cell | 1 |
| >Adult tissues | |
Transcript
| Transcript ID | pfu_aug1.0_7496.1_31399.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_7496.1_31399.t1 atggtgatgacctcaacagctgtgttaccccccttgtgtgcccttggtattaacttctctagctggatcagggtctttgc acagaacaaaccagagctgggtccagagtcagtagttcagattgtcaccatactaagtatattaggagcttggctgggtg ccttccctataccactcgactgggatagaccttggcagatctggcctatcacatgtgttcttggatccattcttggccat atcgttggtttgtttggtggagctatgcacctcatgtacagttataggaaattgaagaaatttaaaatcacatga |
|
Protein
| Protein ID | pfu_aug1.0_7496.1_31399.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_7496.1_31399.t1 MVMTSTAVLPPLCALGINFSSWIRVFAQNKPELGPESVVQIVTILSILGAWLGAFPIPLDWDRPWQIWPITCVLGSILGH IVGLFGGAMHLMYSYRKLKKFKIT |
|