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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_7515.1_52983
Locus scaffold7515.1 : 10016 ... 14063 : +
To GenomeBrowser scaffold7515.1:10016..14063
Genes list of scaffold scaffold7515.1
Synonym pfu_aug2.0_217.1_23687

Manual annotation
Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug1.0_7515.1_52983.t1 1 1 Fork_head 11 94 4.5e-13 49.0 5.0e-17 7.4e-13 48.3

Transcript
Transcript IDpfu_aug1.0_7515.1_52983.t1
Definition-
>pfu_aug1.0_7515.1_52983.t1
atggcagatactactaacagggtgacttcccgccctccttactcctacgttggattgatcacctacgctatccagatgtc
gcctaagaagagactgacactgaggcagatcagagacttcctcaccaaacacttacctaccgtgttcccgccggaatcca
ccaaacttcagaacgtcctccgctctcagctcacacacaacagctgcttctacagggtgccacatgacagaaccattgta
gggagtcggagatgcagtaactggtgcgtggatctgaccttagtcgacgaagctacattcaaacgtcgggtgtacagatg
taagtttgccgacacatggccagatgagattcatacgtaccttgatgttccaaagattgtcctaccaaccaagctgaaat
ccaccactgtacgtgcggtaaattcaacatcacacaactacatcggcgaagatcattttctcagtgagccagcatgtaaa
cgtcccaggactgacctagcttttggcattgacagaattcttagcgaatccttcggatgtacctccagtgctacaacttc
ttcagagattatcaacaggccatcttgtgctcttcaaggctcttctgcatcgccatcattccccatggactattctgtgg
agcaccccagacttgagtatccatcatgcaactacagcttggacatcccatttctgacatcatttgagagtgtgtgtagc
tttccttctctttctgatatccattcgttcgactctgagtttctgcttcaggacacgacgattgagtcttccatgaccaa
acatgaactcgatgacgatacagtgacagatccaccttcgtgtctatacgatatgatcaccgatcttcgcgatgcagacg
tcatcacgacagatccaccagaagacgacattgacgtcatcgttccttcacttcaaccagatgagttatctccctttgac
gatctccttgcctacctgactgaagacaacggtgcttcttgtagtttctccgatcttctcgacgctgattctcgtcaggg
actttag

Protein
Protein IDpfu_aug1.0_7515.1_52983.t1
Definition-
>pfu_aug1.0_7515.1_52983.t1
MADTTNRVTSRPPYSYVGLITYAIQMSPKKRLTLRQIRDFLTKHLPTVFPPESTKLQNVLRSQLTHNSCFYRVPHDRTIV
GSRRCSNWCVDLTLVDEATFKRRVYRCKFADTWPDEIHTYLDVPKIVLPTKLKSTTVRAVNSTSHNYIGEDHFLSEPACK
RPRTDLAFGIDRILSESFGCTSSATTSSEIINRPSCALQGSSASPSFPMDYSVEHPRLEYPSCNYSLDIPFLTSFESVCS
FPSLSDIHSFDSEFLLQDTTIESSMTKHELDDDTVTDPPSCLYDMITDLRDADVITTDPPEDDIDVIVPSLQPDELSPFD
DLLAYLTEDNGASCSFSDLLDADSRQGL

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