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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_7515.1_52984
Locus scaffold7515.1 : 16166 ... 18736 : +
To GenomeBrowser scaffold7515.1:16166..18736
Genes list of scaffold scaffold7515.1
Synonym pfu_aug2.0_217.1_23686

Manual annotation
Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug1.0_7515.1_52984.t1 gi|260784406|ref|XP_002587258.1| hypothetical protein BRAFLDRAFT_129910 [Branchiostoma floridae] 2.0e-24

Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)

Libraries EST count
>Embryonic/Larval stages
mix 1
>Adult tissues

Transcript
Transcript IDpfu_aug1.0_7515.1_52984.t1
Definition-
>pfu_aug1.0_7515.1_52984.t1
atggcctcgttagccaagtatgttatttgtctcctacgaaaccaaatgggaagaccaccacctcttcccgcatttatacc
ggcaataggtggcgctgtgtgtggactgagtgtgctattcgaacgcgcgaatcggcgcaaggaactgtcactatttctga
taccgcacagtttgtatgctttgtatctgtggggactggagaagaaattactacgacatatacgttttagctctgtagtt
ttattttctgtgtctatgatgtcagtgatgcatgcctatgagagagaaccggaatcactgtcactcctgataaatggtgt
acttaaatattttgttggcgagagcagcaatgtacgattacgaccgaaaagagtaaaaacattcagtgaaatgctatcat
ga

Protein
Protein IDpfu_aug1.0_7515.1_52984.t1
Definition-
>pfu_aug1.0_7515.1_52984.t1
MASLAKYVICLLRNQMGRPPPLPAFIPAIGGAVCGLSVLFERANRRKELSLFLIPHSLYALYLWGLEKKLLRHIRFSSVV
LFSVSMMSVMHAYEREPESLSLLINGVLKYFVGESSNVRLRPKRVKTFSEMLS

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