Gene
| Gene Model ID | pfu_aug1.0_7515.1_52986 |
|---|---|
| Locus | scaffold7515.1 : 46166 ... 52325 : + |
| To GenomeBrowser | scaffold7515.1:46166..52325 |
| Genes list of scaffold | scaffold7515.1 |
| Synonym | pfu_aug2.0_217.1_23684 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_7515.1_52986.t1 | 1 | 1 | ADH_N | 88 | 148 | 1.1e-10 | 41.2 | 6.1e-14 | 2.3e-10 | 40.2 |
| pfu_aug1.0_7515.1_52986.t1 | 1 | 1 | ADH_zinc_N | 212 | 331 | 1.7e-09 | 37.3 | 1.3e-12 | 4.8e-09 | 35.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_7515.1_52986.t1 | gi|209733124|gb|ACI67431.1| | Trans-2-enoyl-CoA reductase, mitochondrial precursor [Salmo salar] | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| egg-4cell | 1 |
| 8-16cell | 1 |
| >Adult tissues | |
Transcript
| Transcript ID | pfu_aug1.0_7515.1_52986.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_7515.1_52986.t1 atggcaagtgaaagtgccgccgggcgattagattttcgtctgaactcgcctgtttgtttcacactgttttcaagttgcaa gatgaatattttaacgaaacgtatcgtttttgcactattaaaacaaaaaccacatatgacatttgttgcacggaacataa gtgatagtggaaaatcgttttctgtagtgcattcagaatttggtgacccgaggaaggttttatactcaaaagaaaagcca atacctgaaaatctagggagcaaagaatgtctggtaaaatggttaatggctcctatcaacccatctgatatcaacatgat agagggaacctacatgataagaaatgaactaccagcagttgttggaaatgaaggagtaggagagattctagatgttggtt cctcagttgcaacattcaaaccaggagactgggtaataccaaacggtacaggtattgggacttggtcaacacatggagta gttgacaataacagactgatgccgatagataaagatatccccagattaagtgctgctaccataatggttaacccacctac agcatatagaatgttaaaggattttgtgtgcctgcatgagggtgatttagtaatacagaacggagctaacagtgcagtag gtcaggcagtaattcagctggcaagagaatggaaatacaaaactataaacattgtcagagacagacctgacatcaatgat ctagttacatcactgaagaatcttggggcggactatgtggtgacagaagaatttgtcaagtctcccaaaatgaaagaact cataaaatcactaccttctccacccaagcttgcgttaaatactgttggaggatcaagtgcaacagaattaatcaggcata tgggagataaggcggtaatggttacatatggtggcatgtccaaaaagccagtagttgtcccaaccggtgcgttgattttc aagcgtgtcaaattggctggctattggaacgccaaatggttgcaagaaaacaacttaaatccagagagagtcaaaatgtt tgaggaactgtgtgaattaatcagagattgtaaattccttccaccaataagtgatgttgttccaatcgaggacttccaaa aggcagtaaatgactcactggaaggcttcaaaggacataaaaaggttttaatgatggaagagtcttaa |
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Protein
| Protein ID | pfu_aug1.0_7515.1_52986.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_7515.1_52986.t1 MASESAAGRLDFRLNSPVCFTLFSSCKMNILTKRIVFALLKQKPHMTFVARNISDSGKSFSVVHSEFGDPRKVLYSKEKP IPENLGSKECLVKWLMAPINPSDINMIEGTYMIRNELPAVVGNEGVGEILDVGSSVATFKPGDWVIPNGTGIGTWSTHGV VDNNRLMPIDKDIPRLSAATIMVNPPTAYRMLKDFVCLHEGDLVIQNGANSAVGQAVIQLAREWKYKTINIVRDRPDIND LVTSLKNLGADYVVTEEFVKSPKMKELIKSLPSPPKLALNTVGGSSATELIRHMGDKAVMVTYGGMSKKPVVVPTGALIF KRVKLAGYWNAKWLQENNLNPERVKMFEELCELIRDCKFLPPISDVVPIEDFQKAVNDSLEGFKGHKKVLMMEES |
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