Gene
| Gene Model ID | pfu_aug1.0_7519.1_52987 |
|---|---|
| Locus | scaffold7519.1 : 3251 ... 16426 : + |
| To GenomeBrowser | scaffold7519.1:3251..16426 |
| Genes list of scaffold | scaffold7519.1 |
| Synonym | pfu_aug2.0_868.1_27858 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_7519.1_52987.t1 | 1 | 1 | Herpes_teg_N | 58 | 207 | 1.2e-13 | 50.9 | 1.4e-16 | 2.3e-13 | 49.9 |
| pfu_aug1.0_7519.1_52987.t1 | 1 | 1 | Helitron_like_N | 705 | 903 | 7.7e-28 | 97.4 | 1.2e-30 | 2.1e-27 | 96.0 |
| pfu_aug1.0_7519.1_52987.t1 | 1 | 1 | PIF1 | 1432 | 1769 | 3.3e-29 | 101.9 | 2.6e-30 | 4.3e-27 | 95.0 |
| pfu_aug1.0_7519.1_52987.t1 | 1 | 1 | AAA_30 | 1456 | 1662 | 5.7e-08 | 32.5 | 8.9e-11 | 1.5e-07 | 31.2 |
Transcript
| Transcript ID | pfu_aug1.0_7519.1_52987.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_7519.1_52987.t1 atgagtgatcgctattcttcaaagaatattgttaccggtaatggagctacggcacaagtaaatctctctattcttgcaag aatatttcttatgttttcccttgttataattttgtctggtgatattgagaaaaatccaggacccacttttaagattgatg tccttcaaggttctatccaccagggtgatatacagtttgatgaaatatccagaggaaaacaatgtatttgttgcagtgta atgttcatcgttcacagtgtattaaaacctttacatttgcaacagtggtgttcttcagacttagattcagttttgtatat gggagactttttatatagatttgcaaaagagaaatttaagttaacttcagattacttactattgactgatgttccaaggt tgataaaagtttgcagctctcagttttgtttgaaaattttgaaaacatacagtggaaatgtgaaacatggttataatggt gaatatccgcatgttagattggaaactgcattttgtcaaagtatatccaagtctgcattttctatatttgtctgtaaagg taatgctgtaagcataatagttgttgatgacaggtactatgtgtttgattctcatgcacgtaatttaaaagggtttatgg atattgatggcacatgtactttgatacggaaagacaatgtttcagatgtgtgcacattcttgagaaatgtacttggttct ttatcaggagaaaatgtttatacactgaatgatcagtttgatttgcactgcattgatgttcatgaaatttctgttcaaac agcaaggaaacagaaatctagaggttctgttgtttgtgaaattccgtctgactgtagaccacaaacagactgtataagaa ttagcaattcaaatgtactacatgctggtactgagaaaacaagtacatttacttcaactccaacattttatctggttcct ttaccttttcttggtgaaaattcacaaccacacacacaaaccagaaaacggtcaagtactttatctactctgaatgcaat acagaataagaaattgagattgaccaatgattctaaagctgatcatgaacatgatgaaagaagtatcattgatgcatttg attttaaggttgatcaaggcccagattacatttgcagcagttgtggacaaactttctttagaaattctgttgtaaaagtt gatcgatcatgtgtaaagattcaacgaaatattttacaaaactgtctatctggtatgaaaagtgtcaattctgctgaatg gatatgtaattattgtcatgtgtatttgaaaaaaaatgagataccaccttgttccattggaaacaaactttcatttccaa aaattccaaaagagttgtatgggcttacttctttagaatttaggctagtttcacctagaataccatttatgcagatgaaa gaactacccaggggaggacaactaagtttaaaaggaaacgtggtcaatgtacctgcagatgttgcaaacactgttcgtgt tttacccaggaatatgaatgatacagagactatacctctaaaactaaagagaaatttgtgctacaagtcatttacagcat ttcagaatgtaagaccgaaacgtgttattgaggctgccaattggttagttaaaaatagtacattatttcagaatgaaggc atcattttggatgaatcgtggtctgctgaaaacagagattccggtagaattgatttagatagctctgtcaatcaagatat ttcaaataataatcaaagcgaaaattatttgaataaaaatagaatagacatgtctttaaataccagtaatcttcaagctt ttaatgcaaatgatggtataggaatcgacgacaacaatgaagaagacaatgaaaatgtaggatcaggtaatatggatacc atgatgcagcctgctgattatcgtgaatttaatagaattctgtccgttgcacatggagctggaaatactccattaagtat gttccaagataaatatgctgagttcctttcttttcccaacatttactgtgggcaagttagaactgataataataagagat ataaacctttacattatagtaccatatgcaagtgggaacttcgaaaccatgatcgcagagtagcaaatgatgtgtcaaat atctttttcaaattgaagaaattacaaataaaacagattgttgacaaggtctctctagctataagaaaatgtaaaacaaa gaataagaagtttacagttggtgaaatattgtcagatgttggagtgaataatatattgaaacatgatgagggatacaagg ttctacgaacattgagaggttcgccaccatattgggaaaaagcaaaaaaagatatattcagcatgataagacaattgggt attccaacatggttttgttctttttctgcagcagaaacaaaatggttgcctctacttagatcccattttcagtccaaaca tgatcgaatttgtagtgatgaagaactcttggccctcacttggattgagaaaaatgaccttattaaatcagatcctgtca aatgtgctagatactttgatagaagatttcaagtttttttcactgatgtgttgaagcattcttcaaatcccataggtttg attaaagatttcttttatcgtgtcgagttccagcagcgaggatcaccacacattcatatgttattgtggattgagaattc tccaagtaaaacatgcaatggtaacaaaagcaaaatcatagacttcgtggatcagtatgttacttgtaaaaacgatgata gtatcattgaattagttaattatcaaactcacagacatggtagaacttgtcgtcgcctatctagtaactgcaggttcgga tttcctctccctcctatggaccagactatgattttgcatggtttagatgaaaatttcaaggataggggtattcacgagtc taattacagaaaaattattgaaatattagagactttcaaactgggacaagatgttgatttaagctttaaagactttttga gtaagctatgtcttagcaaggatgaatactttctggcaattcgaagttgtcttcaaccaaatagagcaaagttatttcta aaaaggaaattatcagaaataagagtcaatagctacaatgcattgctgctcaaaacatggaaagcaaatatggatttgca atacatactagatccttatgcctgtgcagcatacattgtttcatatgtttcaaaaggtcagaggggaatgtccaacttgt tgagtaatgcatgcacagctgcaagagaacaaaacaatgacataagagaacaggttagacgagtaggcaatattttcttg aatcatgttgaagtgggagctcaagaagctgtctacataattttagggttaccccttaggagagcatcaagagatgttgt atttatcgataccaatttgcctgagaatagagtaactctcttaaaatcaacctctgctttgcaagaattaccagcaactt caacagatattgaaagtgataatcatataaaacgttataaacgtcgcccaagaagtatgcagtcctgctgcctagttgat tttgtttgctgttatgatgttaaatatgattcaaaatgctcattttcaaatcatactagtaaaaaaatgcccacttcaga aaatgaaataggtgagcttcctgaatgtgagtatgtcttagattacactgatgatccaacagatcaggaggaagtaaatg aagtagcatcaaatgatgttgagatgcattatggaaaagatggatcaatcattaagaaaagacacaatgtcagagttttc tactctatcggttataataaggagagtgagtcagaaaatcactacagagaaaaactaatgctctttctcccttggcgaaa tgaatctgaaattcttggaaattatatgtcttacaaggacagatacttagacaacattgacaatatcgaaaaaaagcttg agatgtacagaacatcaataaatgttgacattgaagaaatagcagaaaatttgcctaatgatactataaatgaaaatgta actgacatggaacaatctgataaaagccctcaagattctgattgtcatacttcaacaattttcactgaatatggctgttt tgaccctggaaaccaaatggctcatgaatatgacttagctgatgacttgggtatacaacatcgtcaaaataatatcgaca atgatgtattggtacaggaaatggaagatgaatcatatcgagcattagtacaaaaactcaatcagaaacagagaacattt ttttatctggtattaaattggttcaaaaccaaaaccttaccaatatactcatttctaactggcggagcaggagtaggaaa aagtttagtcttaaaaacactttatcaagctttactcaaatattacagtcacaaagctggagaaaatccagagagtatca gagttcttgtatgtgcaccaaccggtaaggctgcttataatgtaaacggtgctacaattcattctgcattttgcattcct gcaaatcaaggttttcagtacaagccgttggatatgcagcaattgaattctttgcaagtgaaatatatgcatttgaaagt tgtttttatagatgaacatgatgaaatatcaatggttggcagaagaatgtttaattatcttaacatgagactacaagaaa taaagggaagtactgctccatttggtggtgtatctgttgtagcatttggtgacttgtatcaactaaaacctgtcctggat tcatggatattctcagattccaactctgaacacctggactgtttagcttcaaatatatggaaagacaacttttctatatt tgaattatgtgagataatgagacaaaaagatgactttacatttgcagctctattaaatcgattaagagagggtaactata caacttcagacattgaaactctgaaatccagagtgatagacactgaaaatgaaaatacatccaatttaccacatcttttc acaacaaggaaagaatcaactgactacaacaataaaatttttttgaatacaagatttgaaaaggatcaaataaagtcaat tgattatgtgtctggaaatgtttcaaaggaattacatgataagattttatcaaaaattccaagtgatgcatccaaaacga aagggttgctgtctttattgaatattgctgtaggcactccagcagaaatatgtttaaatgttgatgtttcagatggctta acaaatggtacaccatgcataataaagttattagactacagagttactgattcaaatcgttgtagtattatatgggtgga atttgaagatgaaggggtcggcaaggcatgtagagtaaagtacagtcatttaaaaacatccaatgtctcaattttgccaa gttggactccgattttagaagtctcaaggtcatttcccgtaagttactacaagtcatttcaagtaatcaggagacagttt cctctagttatggcagctgcaaaaactgtacacaaatcacaaggcagtacaatgacttctgctgttgtgcacatgggcaa acgtaaaactgaacacgtgcattatgttgcattgagtagggtaaaaaatcttaattccgttttcattttacaatttaatg aggagaacatttctgtttcacctgaagtaattgaagaaatgcatcgacttagatcccaaagacaaatgcctattcatatt ccacaaatttcaaatgacggacatacttgtacaatcatatttcataacagtagatcattaagaaggcatatagaagatat aaaaaaggataggaattacatcaatgcagatataattgcattcagcgaatcaaatttgaaagattcagatttgacaagta aatatgacattcagggttttcaaacaacaaatagtgaaatgacttcttctttgactccctgtcatggtttgctggtttat tccaatgaaaggtcaaaatttgttgacgtagatgccgacatcagcaaagaagcaattgaaatgattcatccaacagaacc agaagttgttcctatacaaactgcgaaaaaatcaccaaaaggaaaaacaacttcagtgaaagggaagatactttcagatg gagccgttactacagctgctattagagggaataatgtaaatgttaaaacaattgaagtttctgatggacgagacaaggtt aaagcgttcgagccagaattagaggaagtgaccattgaaattgtgggttgtgatgtgggtgacatttctacagagctaat cacagctgattcagaaatattcaccatcgacaacagcatcattaccatgataacagacatagaggaattccctacaacat tacccaaaattatgagggtgaaagttatgaagaacaagatggcaaatctctgtgacaattataaaaatcccaattcttgt gctacaagttcattaaacagatgtactgcattaatttcatacgatgtattaagaaaaccattgaaacattag |
|
Protein
| Protein ID | pfu_aug1.0_7519.1_52987.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_7519.1_52987.t1 MSDRYSSKNIVTGNGATAQVNLSILARIFLMFSLVIILSGDIEKNPGPTFKIDVLQGSIHQGDIQFDEISRGKQCICCSV MFIVHSVLKPLHLQQWCSSDLDSVLYMGDFLYRFAKEKFKLTSDYLLLTDVPRLIKVCSSQFCLKILKTYSGNVKHGYNG EYPHVRLETAFCQSISKSAFSIFVCKGNAVSIIVVDDRYYVFDSHARNLKGFMDIDGTCTLIRKDNVSDVCTFLRNVLGS LSGENVYTLNDQFDLHCIDVHEISVQTARKQKSRGSVVCEIPSDCRPQTDCIRISNSNVLHAGTEKTSTFTSTPTFYLVP LPFLGENSQPHTQTRKRSSTLSTLNAIQNKKLRLTNDSKADHEHDERSIIDAFDFKVDQGPDYICSSCGQTFFRNSVVKV DRSCVKIQRNILQNCLSGMKSVNSAEWICNYCHVYLKKNEIPPCSIGNKLSFPKIPKELYGLTSLEFRLVSPRIPFMQMK ELPRGGQLSLKGNVVNVPADVANTVRVLPRNMNDTETIPLKLKRNLCYKSFTAFQNVRPKRVIEAANWLVKNSTLFQNEG IILDESWSAENRDSGRIDLDSSVNQDISNNNQSENYLNKNRIDMSLNTSNLQAFNANDGIGIDDNNEEDNENVGSGNMDT MMQPADYREFNRILSVAHGAGNTPLSMFQDKYAEFLSFPNIYCGQVRTDNNKRYKPLHYSTICKWELRNHDRRVANDVSN IFFKLKKLQIKQIVDKVSLAIRKCKTKNKKFTVGEILSDVGVNNILKHDEGYKVLRTLRGSPPYWEKAKKDIFSMIRQLG IPTWFCSFSAAETKWLPLLRSHFQSKHDRICSDEELLALTWIEKNDLIKSDPVKCARYFDRRFQVFFTDVLKHSSNPIGL IKDFFYRVEFQQRGSPHIHMLLWIENSPSKTCNGNKSKIIDFVDQYVTCKNDDSIIELVNYQTHRHGRTCRRLSSNCRFG FPLPPMDQTMILHGLDENFKDRGIHESNYRKIIEILETFKLGQDVDLSFKDFLSKLCLSKDEYFLAIRSCLQPNRAKLFL KRKLSEIRVNSYNALLLKTWKANMDLQYILDPYACAAYIVSYVSKGQRGMSNLLSNACTAAREQNNDIREQVRRVGNIFL NHVEVGAQEAVYIILGLPLRRASRDVVFIDTNLPENRVTLLKSTSALQELPATSTDIESDNHIKRYKRRPRSMQSCCLVD FVCCYDVKYDSKCSFSNHTSKKMPTSENEIGELPECEYVLDYTDDPTDQEEVNEVASNDVEMHYGKDGSIIKKRHNVRVF YSIGYNKESESENHYREKLMLFLPWRNESEILGNYMSYKDRYLDNIDNIEKKLEMYRTSINVDIEEIAENLPNDTINENV TDMEQSDKSPQDSDCHTSTIFTEYGCFDPGNQMAHEYDLADDLGIQHRQNNIDNDVLVQEMEDESYRALVQKLNQKQRTF FYLVLNWFKTKTLPIYSFLTGGAGVGKSLVLKTLYQALLKYYSHKAGENPESIRVLVCAPTGKAAYNVNGATIHSAFCIP ANQGFQYKPLDMQQLNSLQVKYMHLKVVFIDEHDEISMVGRRMFNYLNMRLQEIKGSTAPFGGVSVVAFGDLYQLKPVLD SWIFSDSNSEHLDCLASNIWKDNFSIFELCEIMRQKDDFTFAALLNRLREGNYTTSDIETLKSRVIDTENENTSNLPHLF TTRKESTDYNNKIFLNTRFEKDQIKSIDYVSGNVSKELHDKILSKIPSDASKTKGLLSLLNIAVGTPAEICLNVDVSDGL TNGTPCIIKLLDYRVTDSNRCSIIWVEFEDEGVGKACRVKYSHLKTSNVSILPSWTPILEVSRSFPVSYYKSFQVIRRQF PLVMAAAKTVHKSQGSTMTSAVVHMGKRKTEHVHYVALSRVKNLNSVFILQFNEENISVSPEVIEEMHRLRSQRQMPIHI PQISNDGHTCTIIFHNSRSLRRHIEDIKKDRNYINADIIAFSESNLKDSDLTSKYDIQGFQTTNSEMTSSLTPCHGLLVY SNERSKFVDVDADISKEAIEMIHPTEPEVVPIQTAKKSPKGKTTSVKGKILSDGAVTTAAIRGNNVNVKTIEVSDGRDKV KAFEPELEEVTIEIVGCDVGDISTELITADSEIFTIDNSIITMITDIEEFPTTLPKIMRVKVMKNKMANLCDNYKNPNSC ATSSLNRCTALISYDVLRKPLKH |
|