Gene
| Gene Model ID | pfu_aug1.0_755.1_07657 |
|---|---|
| Locus | scaffold755.1 : 59766 ... 72316 : + |
| To GenomeBrowser | scaffold755.1:59766..72316 |
| Genes list of scaffold | scaffold755.1 |
| Synonym | pfu_aug2.0_238.1_27086 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_755.1_07657.t1 | 1 | 1 | Pkinase | 12 | 89 | 7.6e-19 | 67.8 | 4.3e-22 | 1.6e-18 | 66.8 |
| pfu_aug1.0_755.1_07657.t1 | 1 | 1 | Pkinase_Tyr | 12 | 95 | 5.4e-14 | 51.8 | 2.5e-17 | 9.4e-14 | 51.1 |
| pfu_aug1.0_755.1_07657.t1 | 2 | 1 | POLO_box | 202 | 253 | 5.4e-10 | 39.0 | 0.053 | 200.0 | 2.0 |
| pfu_aug1.0_755.1_07657.t1 | 2 | 2 | POLO_box | 413 | 463 | 5.4e-10 | 39.0 | 6.5e-12 | 2.4e-08 | 33.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_755.1_07657.t1 | gi|148229749|ref|NP_001083146.1| | serine/threonine-protein kinase PLK4 [Xenopus laevis] | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
| maleGonad | 1 |
Transcript
| Transcript ID | pfu_aug1.0_755.1_07657.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_755.1_07657.t1 atgatggccgatatattcggcatggcagaaagcatagatctgtacaattattttgaggacaataactatgtgtatttggt gctagagatgggacataacggagaattgaatcgttatctgcgggccaactgtaaggtccttacagagagtgaagcgcaac attttatgaagcaaattgtggaaggaatgctgtacttgcactcccatggaatattgcatcgagaccttactctggccaat cttttgttaaccaaaacaatggatgtggtcaatattctggagagtggtgaggtatgtttggagtttgtaaaacagaaaca gaaagtagaaaaagtcatcgaggtctttgtaatttctgtggatggaatgagcattaaaatttatccaataaatggtggta agggagagaactccggtgatcaccctgtagcgctccccaattctccctccaggcagtttacatttgatcagttacctgaa aaatactggaagaaatatcagtatgcagcaagatttgtgaagttagtgaggtccaaaactccgaaggtcaccatgtatac taaccgtgctaaatgtatgttgatggaaaattctccggatgccgattttgaggcagttttctatgatggtgctaagttta ctattaatgccagtagcatgagaattatagagaagacagggacgtcattggtgcttgagtccgtggacacggaacaacgt ttggcagaagacacgcaaaaactcctcgagtacgtcaaacagtgtcgtcagcaatgtctggagttagagacagtcattga agccgtgcagtcaagatgtagtctacatgaacaattctttcccgttattcttggccgacgaccaagtagtaatcttaacg attctaggacgtcaacgtctacaagtggtactggagtcagctcagttaacctggagtctgccagtacaccatcatcaggg tctgccccccatcctacgatgtcatcgtttgatggtacagtagtgagtacagcaacagatagtgtggacagactgacaga cacacgttacacggacgactcccaggaccgcaccctacagtcacaagctatagccgatcgcctaggaaacatcagtccaa catctacgctaagatcagagaggactgtgggtaatataagccccacgtctagcaccactagtggaaacagtcagttacgc aagccaagggagacgttacgcagtgtatatgtgccagaagtcggatgggcatcgcagttgtcgaatggagagatctgggt gaagtttacagacaaaacacagttaggtgtcaaacccacgaccacagctgtcaagtatgtggatgctcagggcaaacttt atagatatcagaaaacggatatccttccagactttgtaaagtcgcggctgggcaaagttccgttggtcatagaacacctt atgcaagatacgcccgcaacaagatga |
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Protein
| Protein ID | pfu_aug1.0_755.1_07657.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_755.1_07657.t1 MMADIFGMAESIDLYNYFEDNNYVYLVLEMGHNGELNRYLRANCKVLTESEAQHFMKQIVEGMLYLHSHGILHRDLTLAN LLLTKTMDVVNILESGEVCLEFVKQKQKVEKVIEVFVISVDGMSIKIYPINGGKGENSGDHPVALPNSPSRQFTFDQLPE KYWKKYQYAARFVKLVRSKTPKVTMYTNRAKCMLMENSPDADFEAVFYDGAKFTINASSMRIIEKTGTSLVLESVDTEQR LAEDTQKLLEYVKQCRQQCLELETVIEAVQSRCSLHEQFFPVILGRRPSSNLNDSRTSTSTSGTGVSSVNLESASTPSSG SAPHPTMSSFDGTVVSTATDSVDRLTDTRYTDDSQDRTLQSQAIADRLGNISPTSTLRSERTVGNISPTSSTTSGNSQLR KPRETLRSVYVPEVGWASQLSNGEIWVKFTDKTQLGVKPTTTAVKYVDAQGKLYRYQKTDILPDFVKSRLGKVPLVIEHL MQDTPATR |
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