Genome browser

OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_755.1_07658
Locus scaffold755.1 : 73034 ... 89795 : -
To GenomeBrowser scaffold755.1:73034..89795
Genes list of scaffold scaffold755.1
Synonym pfu_aug2.0_14695.1_19853

Manual annotation
Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug1.0_755.1_07658.t1 1 1 DUF2205 37 63 9.1e-07 28.3 1.6e-10 1.2e-06 27.9

Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)

Libraries EST count
>Embryonic/Larval stages
mix 2
>Adult tissues

Transcript
Transcript IDpfu_aug1.0_755.1_07658.t1
Definition-
>pfu_aug1.0_755.1_07658.t1
atgttcagtgtcccgctatcaagtgatagtgatacagctgataatccactgaacaataatatattttcgggacaaccaga
ttttaggaatgatagctacagtttagacccagatatgaatcccgatgaagctgaagagaaacagagactgataaaccaag
tattagaactacaaaacacactagatgaccgagtgttcatggaagaagaagaaaaaatactgtaa

Protein
Protein IDpfu_aug1.0_755.1_07658.t1
Definition-
>pfu_aug1.0_755.1_07658.t1
MFSVPLSSDSDTADNPLNNNIFSGQPDFRNDSYSLDPDMNPDEAEEKQRLINQVLELQNTLDDRVFMEEEEKIL

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