Genome browser

OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_755.1_07664
Locus scaffold755.1 : 152306 ... 156901 : +
To GenomeBrowser scaffold755.1:152306..156901
Genes list of scaffold scaffold755.1
Synonym NA

Manual annotation
Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug1.0_755.1_07664.t1 gi|260833122|ref|XP_002611506.1| hypothetical protein BRAFLDRAFT_117194 [Branchiostoma floridae] 0.0

Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)

Libraries EST count
>Embryonic/Larval stages
mix 1
>Adult tissues
Dshape 1

Transcript
Transcript IDpfu_aug1.0_755.1_07664.t1
Definition-
>pfu_aug1.0_755.1_07664.t1
atggagtcggacgaaatgagtttagaaacgtctgtcccgaccgacttgactctgtctccagaaagagaaacagaaattcg
cgaggaaagaaatacaagaaaaactaagataacaaaacagttgatagaacgcaaacaacttctacatgatttacaacttt
tgaaaatagaattgtcacaaaaaaatctcacgatagagaatatgaaagccgaagctttgaataaagttgaagagcttgag
gaacagctcaccgatgccctacatcaaaaacaaatattgacagctagactagaatctcaactgtctttacaagaacatga
tgcaaagagaagacaagaactgattagaactgaattagaagaattgcagcaacgccagaaacagctagaatcaacaaatg
aacggttgcaggaaaaggctggaaatgttcgacggagtttaaaggatctggagctgacagaggatcgttactatgaactt
cgagcccaaaatgaagatgatatatccttgagagattttgttgctatgagattatttgaagcagcacgtccgctacagac
ggagatagatcagcttcgtatccgagtcaaaacagtggaggaagaaaacaaggccaactcaaaagaagtgcttgaattac
aggagaaactgacagaggagagggaggctcatggtgaagtcagagtcaagtatcagaaaatgaccgtcaactatgctgaa
actaaggcacaactgaaatcagatgattataaggtccagaattttgatagagtgaagacgtaa

Protein
Protein IDpfu_aug1.0_755.1_07664.t1
Definition-
>pfu_aug1.0_755.1_07664.t1
MESDEMSLETSVPTDLTLSPERETEIREERNTRKTKITKQLIERKQLLHDLQLLKIELSQKNLTIENMKAEALNKVEELE
EQLTDALHQKQILTARLESQLSLQEHDAKRRQELIRTELEELQQRQKQLESTNERLQEKAGNVRRSLKDLELTEDRYYEL
RAQNEDDISLRDFVAMRLFEAARPLQTEIDQLRIRVKTVEEENKANSKEVLELQEKLTEEREAHGEVRVKYQKMTVNYAE
TKAQLKSDDYKVQNFDRVKT

  • MGU Home
  • Genome Projects
  • Information
  • Genome Browser
  • Blast Search
  • Keyword Search
  • Downloads

Gene ID:



Keyword:



  • Login

copyright © Marine Genomics Unit 2015
Okinawa Institute of Science and Technology
1919-1 Tancha, Onna-son, Kunigami-gun, Okinawa, Japan 904-0495