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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_7553.1_31404
Locus scaffold7553.1 : 10331 ... 19025 : -
To GenomeBrowser scaffold7553.1:10331..19025
Genes list of scaffold scaffold7553.1
Synonym pfu_aug2.0_2787.1_25536

Manual annotation
Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug1.0_7553.1_31404.t1 1 1 Es2 24 402 0.0 318.3 0.0 0.0 317.8

Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug1.0_7553.1_31404.t1 gi|260808281|ref|XP_002598936.1| hypothetical protein BRAFLDRAFT_164902 [Branchiostoma floridae] 0.0

Transcript
Transcript IDpfu_aug1.0_7553.1_31404.t1
Definition-
>pfu_aug1.0_7553.1_31404.t1
atgtctctttcaaagttaccagaaaaatctatagtatcagcagaatccattacagtcaaaaaatttaagagaccacaaaa
agtattggacgaagaaacgtatacaaaggacttggagggtataatagagagagacttcttcccagatctaccagacctta
agacacaagcagagtacttccaggctttaaagtctaatgaccttgtcaagctaagagaatttcagctcaagtttaatggt
aggagaccaacaactggattatctgaagcttcacctgcgacatttgagacccctgatgtcacacagaatgctggtcactt
tggggatattgatggagagagagatgaaggagagaaagatggaatgagaaagaaaaatgagaaggaggaagaagaaaaca
agaaacgtaaggggctgagtttagatggatacctgtctaagacgacaagcgaggataacgcttcctttgccgatattcta
gaggagactcagaaggcacagagagaaaaacatgcctggctttatgagaatgaacaaagtaggactaaggaagaaaatga
aagacttgcattaccaggaattgagaagcaggcagcaatagaacccggccaagctggtgtagattcctggaagtatcagg
ccagaaactcgctgatgtatgtcccagatggtgcagatatgaatgcccaggaattactggacatgcggaaagccaagtca
agggagatcattcatgagaacacccgttttgtcaataatccttggaataacatgaaaagtaaggagctgatgaagcaagc
agcatcagccaaggccctggcgaactgcggtaaaataggccatgatgggaaagaggtgctaccgcatgaatctcccagaa
ttaatgggtatggttttgttggcacaccctctcctgcccctggggtagaggaatcgccactaatgacgtggggagagata
gaaagcacaccctttagactggagaatgatgtcacagctacaccaggaccgcagtttaagatcccagaggtaccaaagcg
agataagttagctatggagctagcagaaaaagccagtaaagctcatagagataaaaaagaaaaggctatcaaaagcatgc
aagctaggtttgctacaccatcaccaaagtttggcaggagcacaacagaaaggataaattcaatgtcaccagcagctcag
aaacttgctatgtcaagacttggtatacggactcatacagacaaggccctaaaggccagttataccccctccccctccca
tagactcccaggggagaagactccgttaagtctcacccctcgattgactcctaaaagtggcagttccaccccatcagggg
caaaaactcccggtagcaaacgggaaggagccgatgtgtcatcacttactgataatctgttacagttaccaaaacggaaa
aaggcttccgatttcttttga

Protein
Protein IDpfu_aug1.0_7553.1_31404.t1
Definition-
>pfu_aug1.0_7553.1_31404.t1
MSLSKLPEKSIVSAESITVKKFKRPQKVLDEETYTKDLEGIIERDFFPDLPDLKTQAEYFQALKSNDLVKLREFQLKFNG
RRPTTGLSEASPATFETPDVTQNAGHFGDIDGERDEGEKDGMRKKNEKEEEENKKRKGLSLDGYLSKTTSEDNASFADIL
EETQKAQREKHAWLYENEQSRTKEENERLALPGIEKQAAIEPGQAGVDSWKYQARNSLMYVPDGADMNAQELLDMRKAKS
REIIHENTRFVNNPWNNMKSKELMKQAASAKALANCGKIGHDGKEVLPHESPRINGYGFVGTPSPAPGVEESPLMTWGEI
ESTPFRLENDVTATPGPQFKIPEVPKRDKLAMELAEKASKAHRDKKEKAIKSMQARFATPSPKFGRSTTERINSMSPAAQ
KLAMSRLGIRTHTDKALKASYTPSPSHRLPGEKTPLSLTPRLTPKSGSSTPSGAKTPGSKREGADVSSLTDNLLQLPKRK
KASDFF

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