Gene
| Gene Model ID | pfu_aug1.0_7557.1_38570 |
|---|---|
| Locus | scaffold7557.1 : 5526 ... 19295 : + |
| To GenomeBrowser | scaffold7557.1:5526..19295 |
| Genes list of scaffold | scaffold7557.1 |
| Synonym | pfu_aug2.0_129.1_30262 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_7557.1_38570.t1 | 11 | 1 | zf-H2C2_2 | 248 | 259 | 4.2039e-45 | 149.8 | 0.0047 | 7.0 | 7.1 |
| pfu_aug1.0_7557.1_38570.t1 | 9 | 1 | zf-C2H2 | 248 | 270 | 2.29999e-40 | 134.5 | 6.3e-08 | 9.4e-05 | 22.5 |
| pfu_aug1.0_7557.1_38570.t1 | 9 | 1 | zf-C2H2_4 | 248 | 270 | 9.9e-29 | 97.5 | 1.6e-06 | 0.0024 | 18.0 |
| pfu_aug1.0_7557.1_38570.t1 | 9 | 1 | zf-C2H2_jaz | 248 | 268 | 7.6e-12 | 45.0 | 2.4e-06 | 0.0036 | 17.4 |
| pfu_aug1.0_7557.1_38570.t1 | 9 | 1 | zf-C2H2_6 | 248 | 258 | 7.2e-08 | 32.0 | 0.038 | 56.0 | 3.8 |
| pfu_aug1.0_7557.1_38570.t1 | 8 | 1 | zf-met | 248 | 267 | 2.1e-06 | 27.7 | 2.4e-05 | 0.035 | 14.3 |
| pfu_aug1.0_7557.1_38570.t1 | 11 | 2 | zf-H2C2_2 | 262 | 283 | 4.2039e-45 | 149.8 | 1.2e-05 | 0.018 | 15.3 |
| pfu_aug1.0_7557.1_38570.t1 | 9 | 2 | zf-C2H2 | 276 | 297 | 2.29999e-40 | 134.5 | 2.4e-05 | 0.036 | 14.4 |
| pfu_aug1.0_7557.1_38570.t1 | 9 | 2 | zf-C2H2_4 | 276 | 297 | 9.9e-29 | 97.5 | 0.008 | 12.0 | 6.5 |
| pfu_aug1.0_7557.1_38570.t1 | 9 | 2 | zf-C2H2_jaz | 276 | 286 | 7.6e-12 | 45.0 | 0.26 | 390.0 | 1.3 |
| pfu_aug1.0_7557.1_38570.t1 | 9 | 2 | zf-C2H2_6 | 276 | 288 | 7.2e-08 | 32.0 | 0.017 | 26.0 | 4.9 |
| pfu_aug1.0_7557.1_38570.t1 | 11 | 3 | zf-H2C2_2 | 289 | 299 | 4.2039e-45 | 149.8 | 0.1 | 150.0 | 2.9 |
| pfu_aug1.0_7557.1_38570.t1 | 11 | 4 | zf-H2C2_2 | 446 | 459 | 4.2039e-45 | 149.8 | 0.0064 | 9.6 | 6.7 |
| pfu_aug1.0_7557.1_38570.t1 | 9 | 3 | zf-C2H2_6 | 447 | 458 | 7.2e-08 | 32.0 | 0.013 | 19.0 | 5.3 |
| pfu_aug1.0_7557.1_38570.t1 | 9 | 3 | zf-C2H2 | 448 | 470 | 2.29999e-40 | 134.5 | 1.7e-05 | 0.025 | 14.9 |
| pfu_aug1.0_7557.1_38570.t1 | 9 | 3 | zf-C2H2_4 | 448 | 470 | 9.9e-29 | 97.5 | 3.1e-06 | 0.0047 | 17.1 |
| pfu_aug1.0_7557.1_38570.t1 | 9 | 3 | zf-C2H2_jaz | 448 | 470 | 7.6e-12 | 45.0 | 0.011 | 16.0 | 5.7 |
| pfu_aug1.0_7557.1_38570.t1 | 8 | 2 | zf-met | 448 | 470 | 2.1e-06 | 27.7 | 0.012 | 18.0 | 5.6 |
| pfu_aug1.0_7557.1_38570.t1 | 11 | 5 | zf-H2C2_2 | 465 | 487 | 4.2039e-45 | 149.8 | 2.3e-07 | 0.00035 | 20.7 |
| pfu_aug1.0_7557.1_38570.t1 | 9 | 4 | zf-C2H2 | 476 | 498 | 2.29999e-40 | 134.5 | 2.9e-07 | 0.00043 | 20.4 |
| pfu_aug1.0_7557.1_38570.t1 | 9 | 4 | zf-C2H2_4 | 476 | 498 | 9.9e-29 | 97.5 | 1.5e-06 | 0.0022 | 18.2 |
| pfu_aug1.0_7557.1_38570.t1 | 9 | 4 | zf-C2H2_jaz | 476 | 498 | 7.6e-12 | 45.0 | 0.0045 | 6.7 | 6.9 |
| pfu_aug1.0_7557.1_38570.t1 | 9 | 4 | zf-C2H2_6 | 476 | 487 | 7.2e-08 | 32.0 | 0.0067 | 10.0 | 6.2 |
| pfu_aug1.0_7557.1_38570.t1 | 8 | 3 | zf-met | 476 | 497 | 2.1e-06 | 27.7 | 0.3 | 450.0 | 1.2 |
| pfu_aug1.0_7557.1_38570.t1 | 11 | 6 | zf-H2C2_2 | 492 | 514 | 4.2039e-45 | 149.8 | 2.7e-09 | 4.0e-06 | 26.8 |
| pfu_aug1.0_7557.1_38570.t1 | 9 | 5 | zf-C2H2 | 504 | 526 | 2.29999e-40 | 134.5 | 9.9e-09 | 1.5e-05 | 25.0 |
| pfu_aug1.0_7557.1_38570.t1 | 9 | 5 | zf-C2H2_4 | 504 | 526 | 9.9e-29 | 97.5 | 9.1e-07 | 0.0014 | 18.8 |
| pfu_aug1.0_7557.1_38570.t1 | 9 | 5 | zf-C2H2_jaz | 504 | 524 | 7.6e-12 | 45.0 | 0.00051 | 0.76 | 10.0 |
| pfu_aug1.0_7557.1_38570.t1 | 9 | 5 | zf-C2H2_6 | 504 | 524 | 7.2e-08 | 32.0 | 0.038 | 56.0 | 3.8 |
| pfu_aug1.0_7557.1_38570.t1 | 8 | 4 | zf-met | 504 | 525 | 2.1e-06 | 27.7 | 0.0019 | 2.8 | 8.2 |
| pfu_aug1.0_7557.1_38570.t1 | 11 | 7 | zf-H2C2_2 | 518 | 543 | 4.2039e-45 | 149.8 | 2.9e-08 | 4.3e-05 | 23.5 |
| pfu_aug1.0_7557.1_38570.t1 | 9 | 6 | zf-C2H2_6 | 532 | 543 | 7.2e-08 | 32.0 | 0.11 | 170.0 | 2.3 |
| pfu_aug1.0_7557.1_38570.t1 | 9 | 6 | zf-C2H2 | 533 | 555 | 2.29999e-40 | 134.5 | 4.7e-05 | 0.07 | 13.4 |
| pfu_aug1.0_7557.1_38570.t1 | 9 | 6 | zf-C2H2_4 | 533 | 555 | 9.9e-29 | 97.5 | 0.0025 | 3.7 | 8.0 |
| pfu_aug1.0_7557.1_38570.t1 | 9 | 6 | zf-C2H2_jaz | 533 | 553 | 7.6e-12 | 45.0 | 0.05 | 74.0 | 3.6 |
| pfu_aug1.0_7557.1_38570.t1 | 8 | 5 | zf-met | 533 | 552 | 2.1e-06 | 27.7 | 0.35 | 520.0 | 1.0 |
| pfu_aug1.0_7557.1_38570.t1 | 11 | 8 | zf-H2C2_2 | 548 | 569 | 4.2039e-45 | 149.8 | 2.3e-05 | 0.034 | 14.4 |
| pfu_aug1.0_7557.1_38570.t1 | 9 | 7 | zf-C2H2 | 560 | 581 | 2.29999e-40 | 134.5 | 6.1e-07 | 0.0009 | 19.4 |
| pfu_aug1.0_7557.1_38570.t1 | 9 | 7 | zf-C2H2_jaz | 560 | 579 | 7.6e-12 | 45.0 | 0.0019 | 2.9 | 8.1 |
| pfu_aug1.0_7557.1_38570.t1 | 9 | 7 | zf-C2H2_4 | 561 | 581 | 9.9e-29 | 97.5 | 0.00084 | 1.2 | 9.5 |
| pfu_aug1.0_7557.1_38570.t1 | 9 | 7 | zf-C2H2_6 | 561 | 579 | 7.2e-08 | 32.0 | 8.8e-05 | 0.13 | 12.1 |
| pfu_aug1.0_7557.1_38570.t1 | 8 | 6 | zf-met | 561 | 579 | 2.1e-06 | 27.7 | 0.035 | 52.0 | 4.2 |
| pfu_aug1.0_7557.1_38570.t1 | 11 | 9 | zf-H2C2_2 | 573 | 596 | 4.2039e-45 | 149.8 | 2.0e-12 | 3.0e-09 | 36.7 |
| pfu_aug1.0_7557.1_38570.t1 | 9 | 8 | zf-C2H2_6 | 586 | 609 | 7.2e-08 | 32.0 | 9.0e-06 | 0.013 | 15.3 |
| pfu_aug1.0_7557.1_38570.t1 | 9 | 8 | zf-C2H2 | 587 | 609 | 2.29999e-40 | 134.5 | 2.9e-09 | 4.3e-06 | 26.7 |
| pfu_aug1.0_7557.1_38570.t1 | 9 | 8 | zf-C2H2_4 | 587 | 609 | 9.9e-29 | 97.5 | 5.1e-07 | 0.00076 | 19.6 |
| pfu_aug1.0_7557.1_38570.t1 | 9 | 8 | zf-C2H2_jaz | 587 | 608 | 7.6e-12 | 45.0 | 0.0064 | 9.4 | 6.5 |
| pfu_aug1.0_7557.1_38570.t1 | 8 | 7 | zf-met | 587 | 608 | 2.1e-06 | 27.7 | 6.1e-05 | 0.091 | 12.9 |
| pfu_aug1.0_7557.1_38570.t1 | 11 | 10 | zf-H2C2_2 | 601 | 625 | 4.2039e-45 | 149.8 | 6.3e-10 | 9.3e-07 | 28.8 |
| pfu_aug1.0_7557.1_38570.t1 | 9 | 9 | zf-C2H2 | 615 | 637 | 2.29999e-40 | 134.5 | 3.6e-07 | 0.00054 | 20.1 |
| pfu_aug1.0_7557.1_38570.t1 | 9 | 9 | zf-C2H2_4 | 615 | 637 | 9.9e-29 | 97.5 | 4.6e-06 | 0.0068 | 16.6 |
| pfu_aug1.0_7557.1_38570.t1 | 9 | 9 | zf-C2H2_jaz | 615 | 638 | 7.6e-12 | 45.0 | 5.4e-05 | 0.08 | 13.1 |
| pfu_aug1.0_7557.1_38570.t1 | 9 | 9 | zf-C2H2_6 | 615 | 638 | 7.2e-08 | 32.0 | 0.0033 | 4.9 | 7.2 |
| pfu_aug1.0_7557.1_38570.t1 | 8 | 8 | zf-met | 615 | 635 | 2.1e-06 | 27.7 | 1.4e-05 | 0.021 | 14.9 |
| pfu_aug1.0_7557.1_38570.t1 | 11 | 11 | zf-H2C2_2 | 632 | 644 | 4.2039e-45 | 149.8 | 0.34 | 510.0 | 1.2 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_7557.1_38570.t1 | gi|348523916|ref|XP_003449469.1| | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 2 |
| >Adult tissues | |
| adductorMuscle | 1 |
Transcript
| Transcript ID | pfu_aug1.0_7557.1_38570.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_7557.1_38570.t1 atggccaatgcgattgcagcagcttcagagagggacacacaaaacctggagggaatcccctcgactgatcaacacaatgt tgagatgttaaacatagctaagaccatgacagaattacagcctgatggtacagcacaagtcattccagtgtctgtcactg acatgcagggtcagattgtagagctagtacctatgacaggaggagatggtaaacaagtttatgtacagcttactaagcct gttgaaagcgcagagactacacaggagctaacacaagacgaaggaatggaagtatcgggaataggtcagatagaaatcgc tagtgccgtagagaatggggaggtggtaatagatggtctaccccaatcgtatcagaactatgaaaacctcaaaacagaag tccttgaagatggaagtattcagttatactttgtcgatcctaaaaaagatgctggaaattatattgtggaaaaaccatca gaagacccgggtcaaattcaaggttcaatgatgtctgtaacagcaaagaaattcagagatgttgcgacacaaataacagt gtttccaaaatttacccgttcaggtttatttgatgtgtctacacaggttttgccgggagatttgtctatgtcaccaagga aacgagctttagccaatggcacgacagtcattcaaaatagtattaaaactcaaaacgaaagtacagtcattctgaactca ggagaaggagaaataattttcttcaagtgtaacatttgtaataaagtttacaaaaacaaaatgaactggcagaaccatat caagctccatgctcaagagaaagtgtatatgtgtggacactgtggcaaaatctatcaaaaaggtagtctttccacacatt tgcggacacattccgaacttcgtcaaattgctgtatttgagaacttgccgaaaaatctgaagcgaaaaaatcataaggca gtccctggttctgtcatgcttagtgaagaggcatccattattgagcttagcataggagatgtagcgacagaactggatcc tgttttgtttccaccagaggagctacaagcgttggaaaacccaccacaaacacatacagtgacgcaagaggctgagactg agcctgatcccagtgctgatgtggatgtagcggaaaataatacggaaagtaatgtggaaagcaatgttgaaaatccacca agtccccatcctgctccacctgatgatgctgttgtggaagaaactgaggtttacaccacagaggcagccgcagaagtaac gcctgcgattgaaattgaagctgaggcagaggttcaagacggaacgaaaacccgatttatctataaatgtaatatatgtg gaaaggagtataataataagagtaactgtcatagacatttgaaatcacataccgaaagtaagaattacaaatgtggatat tgcggaaaagccttcactcatcgatatgaagttaagatgcactgccgtacccatactggagagaggccgtttaaatgccc catttgcactcgaggatttaatgagagtggaaacttgagacggcatatgaagattcaccagaatgatgattctccataca aatgtggtgtctgctttaagggattcaatgacatgcacagacttaatgcccatactaaagtacacacaggtgatatcgta tgtgatacttgtggaaggaaattcagcaagatttctgatctttaccgtcatatcaagatccacactggcgagagaccata caaatgtgaagtctgcggaaaaaccttttgccagaaggttaatcttacaactcacatgcgtacccacacaggacaaaaag catttaaatgtaacatatgtggggtcgggtttagtagaaaggtgaccatggaagctcacatgaagaatcataaagatgac ggagacttccctgtagtaagaagcagtgccataccggagatgaaacgatcccaggtcaaggtcatggaggctgatgtcat tgaacacatggaggccttgacccaggaatacacagttactgatcatacatttagcagtcctccaaaacgagcaaagaaac gaataaaaaagccgactgttctcgctcagaaaattgtactggccgacggtcaagaaattatcctagaagatggtgctgac gatgatgaggaggacttatga |
|
Protein
| Protein ID | pfu_aug1.0_7557.1_38570.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_7557.1_38570.t1 MANAIAAASERDTQNLEGIPSTDQHNVEMLNIAKTMTELQPDGTAQVIPVSVTDMQGQIVELVPMTGGDGKQVYVQLTKP VESAETTQELTQDEGMEVSGIGQIEIASAVENGEVVIDGLPQSYQNYENLKTEVLEDGSIQLYFVDPKKDAGNYIVEKPS EDPGQIQGSMMSVTAKKFRDVATQITVFPKFTRSGLFDVSTQVLPGDLSMSPRKRALANGTTVIQNSIKTQNESTVILNS GEGEIIFFKCNICNKVYKNKMNWQNHIKLHAQEKVYMCGHCGKIYQKGSLSTHLRTHSELRQIAVFENLPKNLKRKNHKA VPGSVMLSEEASIIELSIGDVATELDPVLFPPEELQALENPPQTHTVTQEAETEPDPSADVDVAENNTESNVESNVENPP SPHPAPPDDAVVEETEVYTTEAAAEVTPAIEIEAEAEVQDGTKTRFIYKCNICGKEYNNKSNCHRHLKSHTESKNYKCGY CGKAFTHRYEVKMHCRTHTGERPFKCPICTRGFNESGNLRRHMKIHQNDDSPYKCGVCFKGFNDMHRLNAHTKVHTGDIV CDTCGRKFSKISDLYRHIKIHTGERPYKCEVCGKTFCQKVNLTTHMRTHTGQKAFKCNICGVGFSRKVTMEAHMKNHKDD GDFPVVRSSAIPEMKRSQVKVMEADVIEHMEALTQEYTVTDHTFSSPPKRAKKRIKKPTVLAQKIVLADGQEIILEDGAD DDEEDL |
|