Gene
| Gene Model ID | pfu_aug1.0_7599.1_02468 |
|---|---|
| Locus | scaffold7599.1 : 11226 ... 38615 : + |
| To GenomeBrowser | scaffold7599.1:11226..38615 |
| Genes list of scaffold | scaffold7599.1 |
| Synonym | pfu_aug2.0_5.1_16675 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_7599.1_02468.t1 | 2 | 1 | Transketolase_N | 17 | 113 | 3.5e-32 | 111.5 | 4.8e-34 | 3.6e-30 | 104.9 |
| pfu_aug1.0_7599.1_02468.t1 | 2 | 2 | Transketolase_N | 166 | 192 | 3.5e-32 | 111.5 | 0.0021 | 15.0 | 4.2 |
| pfu_aug1.0_7599.1_02468.t1 | 1 | 1 | Transket_pyr | 231 | 394 | 2.8e-38 | 131.1 | 5.20022e-42 | 3.8e-38 | 130.7 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_7599.1_02468.t1 | gi|291227199|ref|XP_002733574.1| | PREDICTED: transketolase-like [Saccoglossus kowalevskii] | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| egg-4cell | 1 |
| egg-Dshape | 1 |
| >Adult tissues | |
| maleGonad | 1 |
Transcript
| Transcript ID | pfu_aug1.0_7599.1_02468.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_7599.1_02468.t1 atgactgactatcacagaccggatgctaaaaagttgcaaggcctgatagatattgcaaacaaattacgtatacacagtat caaagctacagacgccagcaactctggacatcctacatcatgctgttccatagcagaagtgatgtctgtgctgttcttca acaccatgcgctacagtatacaggaaccaaggggagctaacaatgacagatttgttttgtccaagggtcatgctgcccct attttatatgctgcatgggctgaggcaggactccttaaggctgatgaccttttgaacctgaggaagctaagttgtgacct ggagggtcacccaacaccttcgcgatggattcatcaaaataagaatcacaaaaataaatctataggttttttactcaaaa ataaattgatgccaaaaattgcagatatatggtatgtaggcattccaactaaagctaagaaggataactcatatggaaaa tttgtgcgatatacatgaattgaggatgcagaaaattggcacgggaagccccttggtgctaagtctgcagatgccctagc tactataacaggattgattaaaaacaatggaccccatggtttgcctatacagagcccatccgataagctgtctgaagccg tggtggatacaatcttgttgtcagaggcacctagctataaaatgggagaaaaggttgctacaagagctgcttatggtaca gccttggtcaagatagggaagtccagtcagagagtcgtagccatggatggtgataccaaaaactccacttttgccatcaa attcaaggatgcttttccggataggttcattgagtgttttatagcagaacagaatctggtgggtgtagggatagggtgtg gtacccgtaataggtgtgtaccatttattagcacctttgcctgcttcctgaccagggcgtttgaccagatacgaatgggt gctatctcacagaccaatgccaactttgtcggatctcactcaggagtctctattggggaagatggcccttcacagatggc actagaggacctgtccatgttccgttctataccaggatctactgtgttctaccctagtgacgctgtatcagcagagaggg ccatagaattagcagctaacactaaaggaatctgctttgtcaggaccagccgtccagcaactcccgtcatatacagtcct gatgagaaatttgaagttggcttggctaaagtacgcacgatagattaa |
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Protein
| Protein ID | pfu_aug1.0_7599.1_02468.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_7599.1_02468.t1 MTDYHRPDAKKLQGLIDIANKLRIHSIKATDASNSGHPTSCCSIAEVMSVLFFNTMRYSIQEPRGANNDRFVLSKGHAAP ILYAAWAEAGLLKADDLLNLRKLSCDLEGHPTPSRWIHQNKNHKNKSIGFLLKNKLMPKIADIWYVGIPTKAKKDNSYGK FVRYTXIEDAENWHGKPLGAKSADALATITGLIKNNGPHGLPIQSPSDKLSEAVVDTILLSEAPSYKMGEKVATRAAYGT ALVKIGKSSQRVVAMDGDTKNSTFAIKFKDAFPDRFIECFIAEQNLVGVGIGCGTRNRCVPFISTFACFLTRAFDQIRMG AISQTNANFVGSHSGVSIGEDGPSQMALEDLSMFRSIPGSTVFYPSDAVSAERAIELAANTKGICFVRTSRPATPVIYSP DEKFEVGLAKVRTID |
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