Gene
| Gene Model ID | pfu_aug1.0_7607.1_67707 |
|---|---|
| Locus | scaffold7607.1 : 6979 ... 24015 : - |
| To GenomeBrowser | scaffold7607.1:6979..24015 |
| Genes list of scaffold | scaffold7607.1 |
| Synonym | pfu_aug2.0_27.1_23284 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_7607.1_67707.t1 | 3 | 1 | Vault | 47 | 87 | 1.9e-19 | 69.3 | 3.5e-06 | 0.017 | 15.1 |
| pfu_aug1.0_7607.1_67707.t1 | 3 | 2 | Vault | 105 | 121 | 1.9e-19 | 69.3 | 0.004 | 20.0 | 5.3 |
| pfu_aug1.0_7607.1_67707.t1 | 3 | 3 | Vault | 139 | 183 | 1.9e-19 | 69.3 | 1.6e-15 | 8.0e-12 | 45.0 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_7607.1_67707.t1 | gi|156406813|ref|XP_001641239.1| | predicted protein [Nematostella vectensis] | 2.0e-29 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 2 |
| egg-Dshape | 1 |
| >Adult tissues | |
| Dshape | 2 |
| mantle | 1 |
Transcript
| Transcript ID | pfu_aug1.0_7607.1_67707.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_7607.1_67707.t1 atgttctcctacttatatattatacaattatggactttttacgaggatccatttcccctctatcctggagaatcgttggt ggatgccgcagatttcctgaagggaaacgcagattattctaaggcagtaaagaagctacccgtcattaaggcaaactatg gcatccgtctgtacgtcaaactggactttgaggacgagctgggaaagcattatgcaggagatacgtaccagctggaaggg ccgctaacatacaaaccaaggccagaagtggatgtccgggagatagttgagcctgttattgttagatcaggaacagttct aaagataaaagccacccaggagttcaccgacagaaatggaacagtaaaatatgatactacatatgaaagcttagaaaaag gtaaagtacaggatgcttatgtgatgggtgaaaaccaggcactcatattgactgctgatgaagaatttaaggataaaatg ttcaaaaacaagctgaggagatgtggtgatagatggatgattcagggtccactagaatatatccctcctattgaagttag catagtcaaaaagagagctaaaatcccactgagcaagaatgaaggaatctatgtccaagactggaaaacaggacagactt ccaaatttaagaagatgatagatgctataggagctgatgtgttggctgccatagcaacctctggaccagagactcagcac aagtttgagtgtctgctactcttatacaggtcaatagaggcagcagcttcccatgaggcagctagaaatgagcagattgc tcagggtgagctggaaagacaaaaactgaccaatgaaaaagaatcagaaaaagagagggccaaattgttagagctacagg ccatagctgcagctgtggaatccacagggcaggccaaagctgaggcccaggcacaagccgagagaatgatcatagaatgt gaaagtgaaattgaggctgcacgacttaaagctgaggctgaggaaatagaacattatgccaagctagaggcccaggctat gctacgatcagaggaattgtccttcacaaagaaccaaaataacctggagatttataaagagagggaaatgtccaatattg aggtgaataaatttatcaaagagttaattttactagactttatggtttag |
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Protein
| Protein ID | pfu_aug1.0_7607.1_67707.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_7607.1_67707.t1 MFSYLYIIQLWTFYEDPFPLYPGESLVDAADFLKGNADYSKAVKKLPVIKANYGIRLYVKLDFEDELGKHYAGDTYQLEG PLTYKPRPEVDVREIVEPVIVRSGTVLKIKATQEFTDRNGTVKYDTTYESLEKGKVQDAYVMGENQALILTADEEFKDKM FKNKLRRCGDRWMIQGPLEYIPPIEVSIVKKRAKIPLSKNEGIYVQDWKTGQTSKFKKMIDAIGADVLAAIATSGPETQH KFECLLLLYRSIEAAASHEAARNEQIAQGELERQKLTNEKESEKERAKLLELQAIAAAVESTGQAKAEAQAQAERMIIEC ESEIEAARLKAEAEEIEHYAKLEAQAMLRSEELSFTKNQNNLEIYKEREMSNIEVNKFIKELILLDFMV |
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