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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_7614.1_67708
Locus scaffold7614.1 : 15056 ... 19592 : +
To GenomeBrowser scaffold7614.1:15056..19592
Genes list of scaffold scaffold7614.1
Synonym pfu_aug2.0_441.1_04180

Manual annotation
Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug1.0_7614.1_67708.t1 1 1 Band_7 1 54 7.8e-07 29.1 7.1e-11 1.1e-06 28.7

Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug1.0_7614.1_67708.t1 gi|269784867|ref|NP_001161585.1| MEC2-like protein [Saccoglossus kowalevskii] 1.0e-37

Transcript
Transcript IDpfu_aug1.0_7614.1_67708.t1
Definition-
>pfu_aug1.0_7614.1_67708.t1
atgcaacaacaactagatgttgctacagatccatggggaattaaagtcgaaagagtggaaatcaaagacgtcagacttcc
catccagttacagagagctatggctgccgaggcagaggcaactcgggaggctagagctaaggtcgtagccgcggaaggag
aacagaatgcgtcacgtgctctaaaggaagccgctgacgtcatcatggagtccccggccgccatgcagctcagatacctc
cagaccctgggaatgatatctgcagagaaaaattctaccatcatcttccctctcccaattgatatgatgcaagcattcat
gaaaaagtag

Protein
Protein IDpfu_aug1.0_7614.1_67708.t1
Definition-
>pfu_aug1.0_7614.1_67708.t1
MQQQLDVATDPWGIKVERVEIKDVRLPIQLQRAMAAEAEATREARAKVVAAEGEQNASRALKEAADVIMESPAAMQLRYL
QTLGMISAEKNSTIIFPLPIDMMQAFMKK

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