Gene
| Gene Model ID | pfu_aug1.0_763.1_00473 |
|---|---|
| Locus | scaffold763.1 : 1 ... 32572 : + |
| To GenomeBrowser | scaffold763.1:1..32572 |
| Genes list of scaffold | scaffold763.1 |
| Synonym | pfu_aug2.0_5370.1_02736 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_763.1_00473.t1 | 2 | 1 | MMR_HSR1 | 149 | 190 | 1.0e-06 | 28.6 | 0.72 | 1500.0 | -1.0 |
| pfu_aug1.0_763.1_00473.t1 | 1 | 1 | Avl9 | 365 | 426 | 2.3e-06 | 26.3 | 1.1e-09 | 2.3e-06 | 26.3 |
| pfu_aug1.0_763.1_00473.t1 | 1 | 1 | IIGP | 541 | 775 | 2.8e-38 | 131.7 | 2.29995e-41 | 4.9e-38 | 130.9 |
| pfu_aug1.0_763.1_00473.t1 | 2 | 2 | MMR_HSR1 | 555 | 661 | 1.0e-06 | 28.6 | 5.7e-09 | 1.2e-05 | 25.2 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_763.1_00473.t1 | gi|326674947|ref|XP_003200237.1| | 2.0e-34 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
| adductorMuscle | 1 |
Transcript
| Transcript ID | pfu_aug1.0_763.1_00473.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_763.1_00473.t1 aaatccagagaggttccgaaccccaaacccctcatcccttagaaaaaatcactctgctgacggagcaacaaaaccatggc catactaaaacacagaaccatagcgaaaccagtgatattaaacttactgatgatcagaacttaggtgaatctgatttaca agccaaacgggtagatgcaatagacaaaaacgtgaaaaaagacaactgtgatattaatgtagataccgcttcagaaaaag ttcaaacagaaagtagaaagaaaaggtcaaaagttcacagaactttatcagaaagttacggcgacctagatgatgttcaa catggtcgcacttcatcgcagtcgtctgtccatagttcatgcagtataggtcctcgaggcatttctgaaccaagctcaac cgaacctttagccgacatgaaaaccattacacaaatagaatcagtgcagaccggtaaagtcatgacaactattgattcag ttgttaatatagaagaaatttccgatacaatgggtatactcgacagtatagatgatctcagtgactcagaaaaggaccgg tcaagatttgatagatcgcttaatttagacgactcaactgaagtattaaagagaagcggaagtatagaagagttagactc accggagagtatactgaaaatagatcaagaggattgcttttcatgggaagaagaccgtctacttctaaaaatagaccaca aagatgacgcagagtcaaataccgttaaagataaagaaggacttggagaggtaaaggaggaaatcgaaggaaaagacacg gtaaaaccaacattagatttgaagcttgaaatctctgctgacgacacaaaaaaagatataatttctcaaccaagtgaagg ggatgttgacaaaaatagccaaaccaatgattctgggataagcacagcaagtgaagtaggacccagtgaaaacagttcga aggaaagctcaccagagaaagagatcaccaaaagtccaggaaggaggaccgctgcaataaaaaacagactcagctctgct ttaagtggactgaaatctaggagactcggttccaagacgccatctagtgagcaagaagtagaaatggaagtagtattgaa agggggacaactcaaaacagatgactgtggatttcctctagctatttttacaaagttctttgatctcctccaagacatca atgtaaggggctttgtgattggtgcaaccaacatgctctttacccagaagaaacatctgtctgatgtcattattgagttc tacatgttctatgctcgatttgttcaggtacacctgggtcaggtttataccattgcaaaagttccaacgatagtcaggac gcaagcgcaaagtgaagtccaatcaatgacacaagcacaggctccagtccttatccaaaggaacaaggataagaacagga catcaaagatggcggtcagagatgttgaagatattgagtttggatcggatgatgctgatagatacgccgataaaccttct gagtcgacagagagagacataccttcagatgaagcgccatgggatgtagacagaataactgctaaactggattcatgtct gggtgaaaatgattacgacgggcttaggaaaaatatggaagccatgaaatcgacaaaattatccattgcagtaatgggtc catcttgcgttggaaagtcctccttcatcaacaacatgcttgggctgaaagaaggggatctaggcgctgcaacagttgga gatggtgacacgactcagataagaaaagcttactcccatcctcaaatcaaacagttagaatattatgatctacctggatt tggaaccccctttttcaaaatgacagataactatctgagagaaattaaagtagaaagttacgatttctttctcatatttt atagtgggacaatttcagaaggcgacgtgtggataatacagaaacttctcgatatgaaaaaaatgtttgccctggtgcgc acaagagctgatgaaatgaaaggaaggtctaaacctttaaatcaaagcattatggaagcaaaggatagatgcgaaaccaa cctgcgagaatttggcatcaaagtgaaagtaccgacatttattatttcaaatatagatgtcaacataggagaaatgaata acttatttcgcttcattaagagcagtttacctgaattgaaaagaatggcaatcacactccatgtgcaagcaaaaactgat gagatcatcgcacagaaagaagagcagcttctagacagcgcgtgggttgcggccctttgcatgggggttgctacagggct tccacttcctggtgttgatattcctataaattatgtgcttcttggtgatgaaataaagtcttgtctactatcgcttggtt tgagtgctgagatgtttgaaagaataccagaagatgtaaagattcgaatgaaaacaacatctactattcataaagatgga ttgaagagatatatactcttaaatataacgaaaattcctactattatttcatgtgctttgcttcaagaggctgttgagat ctgtctgccagtcgttggatcacttataactggatcggtagcttttgtcttctatctgaacttcctgcgaagcattatta ggaagttagcaaacgaggcaagaattcttagaagaatttacttggagtctgtagtgtaa |
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Protein
| Protein ID | pfu_aug1.0_763.1_00473.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_763.1_00473.t1 IQRGSEPQTPHPLEKITLLTEQQNHGHTKTQNHSETSDIKLTDDQNLGESDLQAKRVDAIDKNVKKDNCDINVDTASEKV QTESRKKRSKVHRTLSESYGDLDDVQHGRTSSQSSVHSSCSIGPRGISEPSSTEPLADMKTITQIESVQTGKVMTTIDSV VNIEEISDTMGILDSIDDLSDSEKDRSRFDRSLNLDDSTEVLKRSGSIEELDSPESILKIDQEDCFSWEEDRLLLKIDHK DDAESNTVKDKEGLGEVKEEIEGKDTVKPTLDLKLEISADDTKKDIISQPSEGDVDKNSQTNDSGISTASEVGPSENSSK ESSPEKEITKSPGRRTAAIKNRLSSALSGLKSRRLGSKTPSSEQEVEMEVVLKGGQLKTDDCGFPLAIFTKFFDLLQDIN VRGFVIGATNMLFTQKKHLSDVIIEFYMFYARFVQVHLGQVYTIAKVPTIVRTQAQSEVQSMTQAQAPVLIQRNKDKNRT SKMAVRDVEDIEFGSDDADRYADKPSESTERDIPSDEAPWDVDRITAKLDSCLGENDYDGLRKNMEAMKSTKLSIAVMGP SCVGKSSFINNMLGLKEGDLGAATVGDGDTTQIRKAYSHPQIKQLEYYDLPGFGTPFFKMTDNYLREIKVESYDFFLIFY SGTISEGDVWIIQKLLDMKKMFALVRTRADEMKGRSKPLNQSIMEAKDRCETNLREFGIKVKVPTFIISNIDVNIGEMNN LFRFIKSSLPELKRMAITLHVQAKTDEIIAQKEEQLLDSAWVAALCMGVATGLPLPGVDIPINYVLLGDEIKSCLLSLGL SAEMFERIPEDVKIRMKTTSTIHKDGLKRYILLNITKIPTIISCALLQEAVEICLPVVGSLITGSVAFVFYLNFLRSIIR KLANEARILRRIYLESVV |
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