Gene
| Gene Model ID | pfu_aug1.0_7640.1_67718 |
|---|---|
| Locus | scaffold7640.1 : 7976 ... 19361 : + |
| To GenomeBrowser | scaffold7640.1:7976..19361 |
| Genes list of scaffold | scaffold7640.1 |
| Synonym | pfu_aug2.0_16567.1_26513 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_7640.1_67718.t1 | 1 | 1 | Tfb4 | 67 | 190 | 1.3e-21 | 77.0 | 1.1e-25 | 1.7e-21 | 76.7 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_7640.1_67718.t1 | gi|118098479|ref|XP_001235063.1| | 5.0e-21 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 2 |
| egg-4cell | 1 |
| egg-Dshape | 1 |
| >Adult tissues | |
| adductorMuscle | 1 |
Transcript
| Transcript ID | pfu_aug1.0_7640.1_67718.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_7640.1_67718.t1 atggacatacaacgacgaaacgatgaaaataatacaacatctgtccttaaaaatattggaagaggaattgaatattcagt aatagtcaacattgtaggtcgcatagctcaattgctggagcgccggattttcaaacaggagatcctgggttcgaatccca ctttgtacctgtatatcattgtagatgaagctgtttccagtcagctggtcattgtacttgatacaaatccagtctggtgg ggtcaaaggtcaaacccaggtgatattggccagtttggtttatcagaatgcctggactgtctgatggtatttgctaattc tcatcttatgatgagtcatacaaataaactggttgtcatggcagcacattcgaatgaaagtgtctttctgtatccaaaac ctgcacaaaaatcagtcgccatggaaatagatttggttgatgatgaagctaatccgaatggtgatggacgatatgaactt tttacacagctagatgatcaaattaaaaacggtgtcaaagatcttgtacatagagtacatgaatctgatgaacgtcatat tcaccgcacaaaaacaggtacggtaggattttgtcaacttcggtag |
|
Protein
| Protein ID | pfu_aug1.0_7640.1_67718.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_7640.1_67718.t1 MDIQRRNDENNTTSVLKNIGRGIEYSVIVNIVGRIAQLLERRIFKQEILGSNPTLYLYIIVDEAVSSQLVIVLDTNPVWW GQRSNPGDIGQFGLSECLDCLMVFANSHLMMSHTNKLVVMAAHSNESVFLYPKPAQKSVAMEIDLVDDEANPNGDGRYEL FTQLDDQIKNGVKDLVHRVHESDERHIHRTKTGTVGFCQLR |
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