Gene
| Gene Model ID | pfu_aug1.0_7670.1_38621 |
|---|---|
| Locus | scaffold7670.1 : 27538 ... 36775 : - |
| To GenomeBrowser | scaffold7670.1:27538..36775 |
| Genes list of scaffold | scaffold7670.1 |
| Synonym | pfu_aug2.0_450.1_00752 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_7670.1_38621.t1 | 1 | 1 | Sarcoglycan_2 | 24 | 127 | 2.0e-07 | 29.6 | 8.1e-11 | 2.4e-07 | 29.4 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| egg-4cell | 1 |
| trochophore | 1 |
| >Adult tissues | |
Transcript
| Transcript ID | pfu_aug1.0_7670.1_38621.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_7670.1_38621.t1 atggataatgaaggatacctatggataggtgagatggagaacgagttctctccgccacccctgtgtatagacagccattg tcgtgacatgtttatggaactgatgtatattgtagccgtaccagggggaataactctgctaacagtgctgattgtaggga tctgtatgttctgctgcggaaataaaagcaggacttcagaagcagaggatgatgaaattgagttggataagtactacaca attcgtcgagcctcccagagtttgagagatttgtcacacaagcgagatactgtcctgttatcaagtcgtagtgggtcgct atcgtattccgactctgacagataccgacatagtgctagaggtggtagaggcaataccagctactcagctccaagtactc tacagagggaacgtaggagacatagagagagtgagaggagtgcatcacatgacaggagtgtatccccctccccataccat caagtaccagggagtgggggaaggagtgtcactcctccttaccagtatgttccctctgaacagatcagccttggtgtggg agacagattgttgcctccaagtaacaactccaatggtctacatgatcagcaggctctcctctcacacagtggtagctag |
|
Protein
| Protein ID | pfu_aug1.0_7670.1_38621.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_7670.1_38621.t1 MDNEGYLWIGEMENEFSPPPLCIDSHCRDMFMELMYIVAVPGGITLLTVLIVGICMFCCGNKSRTSEAEDDEIELDKYYT IRRASQSLRDLSHKRDTVLLSSRSGSLSYSDSDRYRHSARGGRGNTSYSAPSTLQRERRRHRESERSASHDRSVSPSPYH QVPGSGGRSVTPPYQYVPSEQISLGVGDRLLPPSNNSNGLHDQQALLSHSGS |
|