Gene
| Gene Model ID | pfu_aug1.0_7676.1_02479 |
|---|---|
| Locus | scaffold7676.1 : 1 ... 15251 : + |
| To GenomeBrowser | scaffold7676.1:1..15251 |
| Genes list of scaffold | scaffold7676.1 |
| Synonym | pfu_aug2.0_1614.1_15155 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_7676.1_02479.t1 | 2 | 1 | IncA | 105 | 198 | 1.0e-05 | 25.2 | 0.016 | 18.0 | 4.8 |
| pfu_aug1.0_7676.1_02479.t1 | 2 | 2 | IncA | 368 | 486 | 1.0e-05 | 25.2 | 3.0e-08 | 3.4e-05 | 23.5 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
Transcript
| Transcript ID | pfu_aug1.0_7676.1_02479.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_7676.1_02479.t1 ctctcagagtggtgtccttacttatgtttgcctacatggcatgtggacagtacatccctcaacaaccattgccaggatat aacccatacggtaataatagcaacaggaaaaccccagcgagtactacaccttacgtcccacccacaatccctaccacccg gccgcctcccgtcaccacccgggctcctgtcaccacccgggcaccgcccgcgacattccaacctgtcaacactccacagt caacaagatcctgtcagtatactttccaagtgcctgaccctaaaggagcttgtgcaggtacatcagcagccttaacacag aagctggaccaggtcaaacatgatttggaccaaaccagattccagtatgttgcccagaacagcatgatccaaagtacact cgccaagattcagagtgacactggtaattatatctctcgagtctccagtttggatagtgatctgaaaaagctccagcaac tggtcagttccaaacctagcaccacagttcaagtccccgtacccacgggaggcaataacagcgccaacacccaatacctc aacaaggttatccacgacactaaagacctactcaccaaagctgtctctgatatcaacaacaagatattcaatgttacatc agaaatgcataagagcgctctagatgaggctaaactgcagtctgaattagagaagcaaatcacgcaacaagcgggacaga ttgccaaagcagaaaccaaactgaccaacatagaaaacatcttgaaaaatctgcagaccgctggtccgacttcacagcca tccccgacatctggtgcttctgcaacacctaataacctcattaaccaacttaaaaacgatatatcccgactggagaatga cgtgaagaatgccgacaagacacaaaatcaagaatataaaaaactgcaggacaggaccgacaaaatcatggatcagttga agaaccagacgacagatattaacaaccttgattccgcaacaaggagtgccctcgtgagactgcaaaatgcagagaaagat gtcagtgatgcgaagaacaaccttactcagctacaacgtaaaatcgagccgcagattcagatcattgcacaagaagtttc ggagacaagtaaaaacttgacaagaatggagaccgaacttggccaagtaggaggaaagctcctcacgaaccaagtcaaat caatgcaagatcgcaaagaaattcaacaactgaaatcaacagcacagacactgacagcaaaaatgggaacgctcaactct accatttccacacaaacttctgagttggccaaattgactgttgacgtacaagcactttcgggatccaccggagctcctgg atccggaaacagtgtctccaaacttgtagaccaaataaagaacaaaacagaggcagacattcagaaaacacaaagtgact tgaaaggtcttcagaaaatagtcatgaccttgcttcaacaagtatctgctttagcaagattgaatggttaa |
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Protein
| Protein ID | pfu_aug1.0_7676.1_02479.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_7676.1_02479.t1 LRVVSLLMFAYMACGQYIPQQPLPGYNPYGNNSNRKTPASTTPYVPPTIPTTRPPPVTTRAPVTTRAPPATFQPVNTPQS TRSCQYTFQVPDPKGACAGTSAALTQKLDQVKHDLDQTRFQYVAQNSMIQSTLAKIQSDTGNYISRVSSLDSDLKKLQQL VSSKPSTTVQVPVPTGGNNSANTQYLNKVIHDTKDLLTKAVSDINNKIFNVTSEMHKSALDEAKLQSELEKQITQQAGQI AKAETKLTNIENILKNLQTAGPTSQPSPTSGASATPNNLINQLKNDISRLENDVKNADKTQNQEYKKLQDRTDKIMDQLK NQTTDINNLDSATRSALVRLQNAEKDVSDAKNNLTQLQRKIEPQIQIIAQEVSETSKNLTRMETELGQVGGKLLTNQVKS MQDRKEIQQLKSTAQTLTAKMGTLNSTISTQTSELAKLTVDVQALSGSTGAPGSGNSVSKLVDQIKNKTEADIQKTQSDL KGLQKIVMTLLQQVSALARLNG |
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