Gene
| Gene Model ID | pfu_aug1.0_7679.1_24260 |
|---|---|
| Locus | scaffold7679.1 : 10566 ... 19893 : + |
| To GenomeBrowser | scaffold7679.1:10566..19893 |
| Genes list of scaffold | scaffold7679.1 |
| Synonym | pfu_aug2.0_315.1_17274 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_7679.1_24260.t1 | 2 | 1 | zf-B_box | 16 | 55 | 4.9e-12 | 45.5 | 4.3e-08 | 9.2e-05 | 22.2 |
| pfu_aug1.0_7679.1_24260.t1 | 2 | 2 | zf-B_box | 74 | 112 | 4.9e-12 | 45.5 | 3.9e-10 | 8.2e-07 | 28.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_7679.1_24260.t1 | gi|115757074|ref|XP_785438.2| | 2.0e-12 |
Transcript
| Transcript ID | pfu_aug1.0_7679.1_24260.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_7679.1_24260.t1 atgagtgataacagtacaacgacattccctactcagatagtggtaacctgtgggttctgtgatgggaccgctgatgttaa gtggttctgtaaatcgtgtgcagcatctttgtgcaacaaatgtaaaacctcccaccttaaagtcactgcattcaagaatc atgtcatagttcatcgtactaatgacgtcatgcgattatacggaccatcaaaaattgctgaacattgccaattccatcct gaaaaggagatatcaacttactgcaatggttgccaagtggcatgctgcacgacatgtcaagttcaaaaccatcagaagca tgacatttccacgatagaagatgcatacttatctgcagagaaaagactgaatgagaacgcaaagaaactagagaaagatg ttatgcccacattggacaaaatgatgaaccaaacggagatgaaccgatctgaaaagagagaaataatcaacgaagttaga gacgaaataaatgcgttcagaatcgaaatgaaacaagcagttgatgtatcatgtgacaatcttctagaaacacttgatca aaatgaagttgaatttgataatcttatcaagagattagatgctcaaaagagaaaagttaaggaacggataaaaggaatag aagaaattattcagaagggtgatttaagtatgataaaacactccccaccctcccctgggaccctgatccctgaggtaagc actccgaagctgactatccccgtctttaatcctgggagggacatattgaccattatcagagatagaatagggacaataga atggacagatagatcgtctggtccaacggatgcttcttccataacaaaatttgatccatcaaggatcaatataaacaagg tcggttcctttaatagtaagagtcctgccacatccatcaccacagcaggtagcaatacagcctgggttacgtggagtgac agtgacaccatgtatctgtatgacagtagtggtaagatggtcaggtctatcacagtgaagggtagtattggtatcaatgg catggtgataagacggtcaggggagatgattgttgcatgtgaggatgggaaaataagacgtgtatcagtgagtggtaagg tgtctactttgataggtacttcaccatttaatccttatggtgtatgtctgactgatagagaggatgtagtagtgtgtatg agtggtcaggataataagaaggacaaccacattgccgtgtactcacctgatacaggtagaaagctacgtgagataagggg gatgggtgtccagggtaaacaacagattacagttccttaccgtgtggttagtaatg |
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Protein
| Protein ID | pfu_aug1.0_7679.1_24260.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_7679.1_24260.t1 MSDNSTTTFPTQIVVTCGFCDGTADVKWFCKSCAASLCNKCKTSHLKVTAFKNHVIVHRTNDVMRLYGPSKIAEHCQFHP EKEISTYCNGCQVACCTTCQVQNHQKHDISTIEDAYLSAEKRLNENAKKLEKDVMPTLDKMMNQTEMNRSEKREIINEVR DEINAFRIEMKQAVDVSCDNLLETLDQNEVEFDNLIKRLDAQKRKVKERIKGIEEIIQKGDLSMIKHSPPSPGTLIPEVS TPKLTIPVFNPGRDILTIIRDRIGTIEWTDRSSGPTDASSITKFDPSRININKVGSFNSKSPATSITTAGSNTAWVTWSD SDTMYLYDSSGKMVRSITVKGSIGINGMVIRRSGEMIVACEDGKIRRVSVSGKVSTLIGTSPFNPYGVCLTDREDVVVCM SGQDNKKDNHIAVYSPDTGRKLREIRGMGVQGKQQITVPYRVVSN |
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