Gene
| Gene Model ID | pfu_aug1.0_7683.1_09612 |
|---|---|
| Locus | scaffold7683.1 : 1 ... 10873 : + |
| To GenomeBrowser | scaffold7683.1:1..10873 |
| Genes list of scaffold | scaffold7683.1 |
| Synonym | NA |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_7683.1_09612.t1 | 1 | 1 | SNARE | 131 | 164 | 2.2e-09 | 36.8 | 2.7e-12 | 2.2e-09 | 36.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_7683.1_09612.t1 | gi|291220996|ref|XP_002730509.1| | PREDICTED: syntaxin-7-like [Saccoglossus kowalevskii] | 1.0e-18 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
Transcript
| Transcript ID | pfu_aug1.0_7683.1_09612.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_7683.1_09612.t1 aaagtagcagagaaggtgaagaaatcagtgaagctaacccccaaacccccaccctctatgggaggtggattcaatgacgg ttttgatgatgatcaaacacgttttatggaagaggctcggagaagagaggaattacaagcccaggaacaaataatagagg atgacctggccttaatacaggacagagaggagagaatcagacagttagagaaagtagcagagaaggtgaagaaatcagtg aagctgacccccaaacccccaccctctatgggaggtggttttaatgatggttatgatgatgatcaaacacgttttatgga ggaggctcggagaagagaggaattacaagcccaggaacaaataatagaggatgacctggccctaatacaggacagagagg agagaatcagacagttagagtcagacatccttgatgtaaacgaaatattcagagatttagctacaatggttaatgagcaa ggagaaacaattggtaaatatacttcactaaatatttattga |
|
Protein
| Protein ID | pfu_aug1.0_7683.1_09612.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_7683.1_09612.t1 KVAEKVKKSVKLTPKPPPSMGGGFNDGFDDDQTRFMEEARRREELQAQEQIIEDDLALIQDREERIRQLEKVAEKVKKSV KLTPKPPPSMGGGFNDGYDDDQTRFMEEARRREELQAQEQIIEDDLALIQDREERIRQLESDILDVNEIFRDLATMVNEQ GETIGKYTSLNIY |
|