Gene
| Gene Model ID | pfu_aug1.0_7683.1_09613 |
|---|---|
| Locus | scaffold7683.1 : 11844 ... 16665 : - |
| To GenomeBrowser | scaffold7683.1:11844..16665 |
| Genes list of scaffold | scaffold7683.1 |
| Synonym | pfu_aug2.0_524.1_14264 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_7683.1_09613.t1 | 1 | 1 | DUF4532 | 6 | 181 | 5.0e-23 | 81.4 | 1.1e-26 | 1.6e-22 | 79.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_7683.1_09613.t1 | gi|291241475|ref|XP_002740637.1| | PREDICTED: uncharacterized protein ENSP00000372125 homolog [Saccoglossus kowalevskii] | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 2 |
| >Adult tissues | |
| Dshape | 1 |
Transcript
| Transcript ID | pfu_aug1.0_7683.1_09613.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_7683.1_09613.t1 atgagggcaaaggagccaaagtatactggattctctcctagaccaatccagaaactagcagtaaagaaaaaacccagatc aattctcgacatagaatgtaaccactttataaggacgtcaacagaggattttactcatggccacgagcctttgacttata aaatgtggttagaagctggtaaacatgaccctcccttccctccaaggccggatcctaatttcaacagtaatgtttggaga aacttcagaaaacagtatgggttcaacacaacggccgagggaaggaaaatctctgaagtcatagccaccatgtatcccct caacattcctgctccatcaagagtcggtgatcatactttcgaaaaatacatcagggaaaccaagctgttcgttaatccta aaatagcatcattagctatgaataggacaaaagcagatgttcaagagttcaaacgattgaggtgtcgcactgatgctaga aaccctccaatggatgacacaggtaatatccttccaccagagaatttcaaaaagtatgagcagcgatttgttcctcctcc gcccctcccacctacaccacctccagccaatcagaaaatagactccctgggccagaggtacgtgcccagatcagaaccac atttatggaaattatcatataaactgacacatccacaatacgagaatgtcagacaagagataaaaaaacgtcngaatccc gtaagccaaaagattgctaaaaattatatcattttgatcgattttcacgtatattttttaattcaaaactcaatgtattg a |
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Protein
| Protein ID | pfu_aug1.0_7683.1_09613.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_7683.1_09613.t1 MRAKEPKYTGFSPRPIQKLAVKKKPRSILDIECNHFIRTSTEDFTHGHEPLTYKMWLEAGKHDPPFPPRPDPNFNSNVWR NFRKQYGFNTTAEGRKISEVIATMYPLNIPAPSRVGDHTFEKYIRETKLFVNPKIASLAMNRTKADVQEFKRLRCRTDAR NPPMDDTGNILPPENFKKYEQRFVPPPPLPPTPPPANQKIDSLGQRYVPRSEPHLWKLSYKLTHPQYENVRQEIKKRXNP VSQKIAKNYIILIDFHVYFLIQNSMY |
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