Gene
| Gene Model ID | pfu_aug1.0_7686.1_53015 |
|---|---|
| Locus | scaffold7686.1 : 24637 ... 30565 : - |
| To GenomeBrowser | scaffold7686.1:24637..30565 |
| Genes list of scaffold | scaffold7686.1 |
| Synonym | pfu_aug2.0_1957.1_25219 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_7686.1_53015.t1 | 7 | 1 | zf-C2H2 | 795 | 805 | 5.1e-10 | 39.0 | 0.53 | 1300.0 | 0.0 |
| pfu_aug1.0_7686.1_53015.t1 | 7 | 2 | zf-C2H2 | 857 | 878 | 5.1e-10 | 39.0 | 8.2e-05 | 0.2 | 12.0 |
| pfu_aug1.0_7686.1_53015.t1 | 7 | 3 | zf-C2H2 | 895 | 916 | 5.1e-10 | 39.0 | 0.0081 | 20.0 | 5.7 |
| pfu_aug1.0_7686.1_53015.t1 | 7 | 4 | zf-C2H2 | 922 | 943 | 5.1e-10 | 39.0 | 3.8e-05 | 0.095 | 13.0 |
| pfu_aug1.0_7686.1_53015.t1 | 7 | 5 | zf-C2H2 | 948 | 970 | 5.1e-10 | 39.0 | 0.0001 | 0.25 | 11.7 |
| pfu_aug1.0_7686.1_53015.t1 | 7 | 6 | zf-C2H2 | 979 | 1001 | 5.1e-10 | 39.0 | 5.9e-05 | 0.15 | 12.4 |
| pfu_aug1.0_7686.1_53015.t1 | 7 | 7 | zf-C2H2 | 1007 | 1030 | 5.1e-10 | 39.0 | 7.0e-07 | 0.0017 | 18.5 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
Transcript
| Transcript ID | pfu_aug1.0_7686.1_53015.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_7686.1_53015.t1 atggaaaaggaagtgaaaacggaaaagaatggaaggaagatccaatcggtgatgaaacgaaagttatataatgacgattg tatgagagattcgagaaaagacggatgtttgaaaaagaaatgttcaaacgaaacaggaaatcaaagtgaagaaattccaa gtccttccgatcatactgagtttattagtaaacaagacgcaatatctcatgttggacgacctaagttgcaggcacttaca cattccactactgttactcaaacagcagagcaagcaaacattacacctcaaaccttcattcacaggtctaccaattctca atcactatcacttacagatccaattccgctcgtacccattcctatttctcaagcagaaaccctcaatgttcccaatccca catctcttataagggatactctgatgaagaaacattcaacagacgcggcaaatgtacctcattccacatttgataatagt attatacttcagtcaccttcaggcaacctttattatccattatcaacaaatactgttatggacaaagtgccaacacatag caacatgatgattcagccttcacagctcagcaaaattggttgtacacacaatctgcggactggcttaatgttggttgtgc cctctggaataagtaatgccagtatcggttccaatacgaaacataatactctttgcaatgttgttgaacatctgcagcag aaagcacgtgtaccgcaatcagactgtagtgaaggagaattgactaaaacaacaagtgttgaaaatggaagaccaatcga gagttatcaaagaaccattatcaacgatgacggttcaccaacagaaatcgccggtatttcgtccgttgcaaacagtaaag gtagttgtagatattctctccggaggaatcttaaacataaaaactacacagaatgtagcgataatgaaaatacggatgat gaatctagttctgatgaaagttatgaagaagatagtgatgaaagcgacgtcaatgataaaatgaagaagacaaatgtaaa caaaggaaatgacaattcactaaacggatgcccgattaatgcttctgccaggaaagacctcaacctaattgatgtatatc acaaactgagtcaagatgcgaaccaaataccaagttacaatcattcaagcacactgtcagggaaagggtttatccagata aagcagtcatctagtggaagagaaaggcaagtctcaagcaatggtggtcaatgcgagaagaaaagcaacgaactgttaag tcaagctaagactgtatgtagtgaaaaacaaagacaagccttaagtaatggtgttttatgccagaagaaagacaatgaaa tgtttagtaaagctaagacagtgtgtagtttaaaagaaaggcaaacctcaagcaatggtgctttatgccagaagaaaaac aacgaactgttaagtcaagctaagacagcatgtagtcgaaaacaaagacaagacttaagcattggtgttttatatgagaa caaaagaaatgaaatgatagtggaaggatctgcattaaggaatcaaggactgattaaaaacgccaaaacagttcaacaac gacgaaaacgtgcaacaaaatcgcattcgaaaaaaggccaaaaatcgaaaaataacaaattaaccgcttctggctctaaa aaagatacaaattatccaattgatgaatcagaagaagaaaggaaaatggaaatgcttgataaagaagggagggctctgga agacaaatggaaatatatgtacggagaggaagacacatttgaaaatctcagtgatatacataaagtttggagaatgtgtg tatatgacgacagcgaggctttcggacaatatactaaatacgtcgagtggaattgttttatgagatgcatttattgtaat gtgatatttgaacgatttgcagcctatttgaaacatagtttaagtggaacaaaatgctcagcaaaattcttccatggaga aggtggggacagagtgtgctttccatgcaataagatcggcttaaagaagcacggatggataaggcatatgctgcagaaga aatcccatggagggcataaatgtgcttacatccctaagctgaaatttttggcagctcgtagcaaaaacacggacaattat tctggggaaacatctggagaagaacaatctctaacaattccaaacaaagagacagaaggtacccccaagtggacatctag gaatgcacttaatggcaaagacacagaaggtcattctgagggaacatctatggatgaacaatctccagtggatcaatccg gtgcctttttccacaggatagttgaaagagaagaggagtggcataacacttttgaacctggatttcaatgtaaggcttgt actcgtgctacaaatgtctttatttctcttttcgaagcagtgggccatataaagaaaacgcacacaaatgaagaagaaac ttgtttcaaatatagattgaaacaacaattcaaaggcaaagagattatcacagtaaaacatgcgaataagtgtagagagg ggttcctgtgttctttatgtggaatatcttacaaaacggtagaatctttacgcaggcatttagtattagtgcacaaagat gtgcctccgaaagagtttggacttgatgattcaagtttgctttgtccccattgtggtagaactttctctatacatagaaa gacgacatatcgaaatcacttactgatacactctgaccctgtgacgtgtccaaaatgtaaccaagtttgcaaaaacaagg ccacgtatcttcgccatgcaaagaaacacagagatccgattttcacctgcaagaaatgtgggaaaacatttgaggagagg catcaatacgctcaacacaagcacaagcataaagttaaagaaaacgggagacaatttaaatgcgaaatatgtgacaaagc ttttatgttcaagcatcatttaattacccattcagtggtccattctactaaccgtaagtttgcatgtgacgattgtggaa tgacattcaaattgaagcatcatttgaaaaatcatttagaaagggcatgtccgaagaaaaaatga |
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Protein
| Protein ID | pfu_aug1.0_7686.1_53015.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_7686.1_53015.t1 MEKEVKTEKNGRKIQSVMKRKLYNDDCMRDSRKDGCLKKKCSNETGNQSEEIPSPSDHTEFISKQDAISHVGRPKLQALT HSTTVTQTAEQANITPQTFIHRSTNSQSLSLTDPIPLVPIPISQAETLNVPNPTSLIRDTLMKKHSTDAANVPHSTFDNS IILQSPSGNLYYPLSTNTVMDKVPTHSNMMIQPSQLSKIGCTHNLRTGLMLVVPSGISNASIGSNTKHNTLCNVVEHLQQ KARVPQSDCSEGELTKTTSVENGRPIESYQRTIINDDGSPTEIAGISSVANSKGSCRYSLRRNLKHKNYTECSDNENTDD ESSSDESYEEDSDESDVNDKMKKTNVNKGNDNSLNGCPINASARKDLNLIDVYHKLSQDANQIPSYNHSSTLSGKGFIQI KQSSSGRERQVSSNGGQCEKKSNELLSQAKTVCSEKQRQALSNGVLCQKKDNEMFSKAKTVCSLKERQTSSNGALCQKKN NELLSQAKTACSRKQRQDLSIGVLYENKRNEMIVEGSALRNQGLIKNAKTVQQRRKRATKSHSKKGQKSKNNKLTASGSK KDTNYPIDESEEERKMEMLDKEGRALEDKWKYMYGEEDTFENLSDIHKVWRMCVYDDSEAFGQYTKYVEWNCFMRCIYCN VIFERFAAYLKHSLSGTKCSAKFFHGEGGDRVCFPCNKIGLKKHGWIRHMLQKKSHGGHKCAYIPKLKFLAARSKNTDNY SGETSGEEQSLTIPNKETEGTPKWTSRNALNGKDTEGHSEGTSMDEQSPVDQSGAFFHRIVEREEEWHNTFEPGFQCKAC TRATNVFISLFEAVGHIKKTHTNEEETCFKYRLKQQFKGKEIITVKHANKCREGFLCSLCGISYKTVESLRRHLVLVHKD VPPKEFGLDDSSLLCPHCGRTFSIHRKTTYRNHLLIHSDPVTCPKCNQVCKNKATYLRHAKKHRDPIFTCKKCGKTFEER HQYAQHKHKHKVKENGRQFKCEICDKAFMFKHHLITHSVVHSTNRKFACDDCGMTFKLKHHLKNHLERACPKKK |
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