Gene
| Gene Model ID | pfu_aug1.0_77.1_50602 |
|---|---|
| Locus | scaffold77.1 : 31347 ... 38115 : - |
| To GenomeBrowser | scaffold77.1:31347..38115 |
| Genes list of scaffold | scaffold77.1 |
| Synonym | NA |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_77.1_50602.t1 | 1 | 1 | FAD_binding_2 | 5 | 55 | 3.6e-06 | 26.0 | 6.9e-09 | 5.4e-06 | 25.5 |
| pfu_aug1.0_77.1_50602.t1 | 2 | 1 | Pyr_redox_3 | 6 | 48 | 6.4e-09 | 36.1 | 1.6e-10 | 1.3e-07 | 31.9 |
| pfu_aug1.0_77.1_50602.t1 | 1 | 1 | NAD_binding_8 | 7 | 89 | 5.1e-12 | 45.6 | 3.5e-14 | 2.7e-11 | 43.3 |
| pfu_aug1.0_77.1_50602.t1 | 1 | 1 | Amino_oxidase | 12 | 329 | 5.49996e-41 | 141.0 | 2.20004e-42 | 1.7e-39 | 136.1 |
| pfu_aug1.0_77.1_50602.t1 | 2 | 2 | Pyr_redox_3 | 227 | 276 | 6.4e-09 | 36.1 | 0.25 | 200.0 | 1.9 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_77.1_50602.t1 | gi|241998702|ref|XP_002433994.1| | peroxisomal N(1)-acetyl-spermine/spermidine oxidase, putative [Ixodes scapularis] | 3.00018e-42 |
Transcript
| Transcript ID | pfu_aug1.0_77.1_50602.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_77.1_50602.t1 atgagccagagggtggtgattatcggagctggggtggcgggactgagcgctgctaggactctcatggataatggcatcga tgatttcctgatagtagaggcacaagacaggatcggcggtagggtgcataccctatactcagaaaattctactaaaatcc tatctgtaaaacatacgatttcttcatacgtagacggaaatgtactggagttaggtgctcagtggatacacggagaggaa gggaacgaggtgtttgagctggcagacaaaggcaacttgatatggaacaaggaacacggggacaaacacagcccttccgg agcgtcaaagtatttgaatcatgacttctgtaagacagatgggacaataattgatagagatatcgtaactgatacatgtc atgccttggaggacatatacacggatctgaacagctgtgatcatgtgacacatgagtaccagaatctccaagatgagtat aacgccaggtttcagaagcttatagactcaaatgacctgaaaggcgacgtcacagagcagaaacgtgggatttaccggtg gagaacagcgttcgagatccacgacaacgcgtgttactcgctacgtgacgtcaagtgcccgtgccgctacacgccatgtg aaggcaacggtctggtagaacttcagaacgggtttcaatccgttttggacacgatacttcaaaatgtgcccagagataaa atacttcttaacacccctgttaaaactatacactggaatcacagttctagtacttgcagaaccgaatgcgagtccggaat gtctttgatttgtgatcaagtgatcttaacgtcatcgattggttatcttaagaaaaaccatttaactatgttcaatccaa atctccctccatcaaaacttcagactattgagaataccggatatggaagtgtgcttaaaatattcttagaatgggagatg ccattttggagtgagggatttacaggaattcaattcgtatgggactgtgatatcgataatgtggaaaacagtaaaataag agaggtaaaatattccaaaatttctaccttttttgtcgatattatcggatttcctatccgagcacccctacctcttccga ccttaattttacaatcttaa |
|
Protein
| Protein ID | pfu_aug1.0_77.1_50602.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_77.1_50602.t1 MSQRVVIIGAGVAGLSAARTLMDNGIDDFLIVEAQDRIGGRVHTLYSENSTKILSVKHTISSYVDGNVLELGAQWIHGEE GNEVFELADKGNLIWNKEHGDKHSPSGASKYLNHDFCKTDGTIIDRDIVTDTCHALEDIYTDLNSCDHVTHEYQNLQDEY NARFQKLIDSNDLKGDVTEQKRGIYRWRTAFEIHDNACYSLRDVKCPCRYTPCEGNGLVELQNGFQSVLDTILQNVPRDK ILLNTPVKTIHWNHSSSTCRTECESGMSLICDQVILTSSIGYLKKNHLTMFNPNLPPSKLQTIENTGYGSVLKIFLEWEM PFWSEGFTGIQFVWDCDIDNVENSKIREVKYSKISTFFVDIIGFPIRAPLPLPTLILQS |
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