Gene
| Gene Model ID | pfu_aug1.0_77.1_50603 |
|---|---|
| Locus | scaffold77.1 : 44506 ... 53176 : + |
| To GenomeBrowser | scaffold77.1:44506..53176 |
| Genes list of scaffold | scaffold77.1 |
| Synonym | pfu_aug2.0_11.1_03384 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_77.1_50603.t1 | 1 | 1 | COX15-CtaA | 2 | 302 | 0.0 | 264.4 | 0.0 | 0.0 | 264.2 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_77.1_50603.t1 | gi|72009705|ref|XP_780720.1| | PREDICTED: cytochrome c oxidase assembly protein COX15 homolog [Strongylocentrotus purpuratus] | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| egg-4cell | 1 |
| 8-16cell | 1 |
| >Adult tissues | |
| Dshape | 1 |
| maleGonad | 1 |
Transcript
| Transcript ID | pfu_aug1.0_77.1_50603.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_77.1_50603.t1 atggtagattggcagctaatcaaagatatgaagcccccaggaagtcagaaggaatgggaggaggagtttgagagatataa gcagtatccagagtataaatatgtatcaagccagaaggagatgaccttgtcagatttcaagtttatattttacatggagt ggggacatcgaatgtggggacgaatggttggaatggtattcttagtaccagctggatttttcctttataagggctggatc tccaaagcactcaaaccaaggctgctggtgcttactggattgttaggatttcagggattccttggctggtacatggtaaa gagtggtttacaggatcaacctaaggacacagatattccccgtgtcagtcagtacagactggcttcacatcttggctcgg ctttcctgttatatacacttttcctttggcaaggcctcaataaattcctcccttataataaatatccatacacaaatcag atgaggaacataagaatgggtgcgttcggcatcaaggctcttgtatttaccacagctttgtcaggagcctttgtagcagg gcttgatgcaggtcttacatataatagttggccaaagatggccgacagatggatcccagacgacctcttagctttagatc caaaatggaagaatacctttgaaaatccaaccactgtgcagttcaaccataggcatttggctgagagtacagttctggca atagctggattttggtggatgtgtcggaaggcacccctaccccccagggctagaatggctgttaactgtttattaggaat gtccctcatacaggcaacccttggtatcaccactctcctgacatatgtacctacaccattagctgctagtcaccagtctg gatccttagtgctcctcagtatagctatttggttatgtcatgaactccgcagattgccgaagtaa |
|
Protein
| Protein ID | pfu_aug1.0_77.1_50603.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_77.1_50603.t1 MVDWQLIKDMKPPGSQKEWEEEFERYKQYPEYKYVSSQKEMTLSDFKFIFYMEWGHRMWGRMVGMVFLVPAGFFLYKGWI SKALKPRLLVLTGLLGFQGFLGWYMVKSGLQDQPKDTDIPRVSQYRLASHLGSAFLLYTLFLWQGLNKFLPYNKYPYTNQ MRNIRMGAFGIKALVFTTALSGAFVAGLDAGLTYNSWPKMADRWIPDDLLALDPKWKNTFENPTTVQFNHRHLAESTVLA IAGFWWMCRKAPLPPRARMAVNCLLGMSLIQATLGITTLLTYVPTPLAASHQSGSLVLLSIAIWLCHELRRLPK |
|