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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_7719.1_09619
Locus scaffold7719.1 : 10096 ... 26464 : +
To GenomeBrowser scaffold7719.1:10096..26464
Genes list of scaffold scaffold7719.1
Synonym pfu_aug2.0_1955.1_18613

Manual annotation
Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug1.0_7719.1_09619.t1 1 1 ClpB_D2-small 89 167 4.2e-10 39.3 2.7e-13 1.0e-09 38.1

Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug1.0_7719.1_09619.t1 gi|307180438|gb|EFN68464.1| 2.0e-39

Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)

Libraries EST count
>Embryonic/Larval stages
mix 1
>Adult tissues
maleGonad 1

Transcript
Transcript IDpfu_aug1.0_7719.1_09619.t1
Definition-
>pfu_aug1.0_7719.1_09619.t1
atggtggagcttcttctacagaatggagctgaccctaatgtggaggatgaatattctaattacctgactgtgggtagaga
gaagggcatccatcccttacatggagcagaccctaccatagagaactccaatggtcaccgtgctgtagattacgctaaaa
caccctccatgcagtccatgctggaaaaggctgagaaaacaagggcattcaagagagatgaatttctgggaaggataaat
gaaatagtttactttctccctttttcaagatctgaactgagtaaattagtgagtaaggagctggaattctgggcaaatca
ggctgacaagaagcacaacataaagttacaatgggatcataatgttgtagacatattggcagatggatatgatttacatt
acggggccaggtctataaaatatgaggtggagagaagagtcgtgacccagcttgccatggctcatgagaggaagctaatt
gataaaggatgtgtcataaaactaacggcctctaacgcggaggacatgacaaaaacggtgaatcaacctgacaaaccagc
taccatcaaactacagatactacaaaaaggcaaaaaggaggagtttgtggatattgaccttcacacagataaaaatccat
ttgatcttggctttaagtaa

Protein
Protein IDpfu_aug1.0_7719.1_09619.t1
Definition-
>pfu_aug1.0_7719.1_09619.t1
MVELLLQNGADPNVEDEYSNYLTVGREKGIHPLHGADPTIENSNGHRAVDYAKTPSMQSMLEKAEKTRAFKRDEFLGRIN
EIVYFLPFSRSELSKLVSKELEFWANQADKKHNIKLQWDHNVVDILADGYDLHYGARSIKYEVERRVVTQLAMAHERKLI
DKGCVIKLTASNAEDMTKTVNQPDKPATIKLQILQKGKKEEFVDIDLHTDKNPFDLGFK

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