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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_7719.1_09622
Locus scaffold7719.1 : 63716 ... 68887 : +
To GenomeBrowser scaffold7719.1:63716..68887
Genes list of scaffold scaffold7719.1
Synonym pfu_aug2.0_1955.1_18610

Manual annotation
Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug1.0_7719.1_09622.t1 1 1 4HBT_2 1 117 7.5e-16 58.6 1.2e-19 8.7e-16 58.4

Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug1.0_7719.1_09622.t1 gi|260812247|ref|XP_002600832.1| hypothetical protein BRAFLDRAFT_214987 [Branchiostoma floridae] 3.0e-25

Transcript
Transcript IDpfu_aug1.0_7719.1_09622.t1
Definition-
>pfu_aug1.0_7719.1_09622.t1
atgaacaattcccgttacctacgggaatgtgactttggacgtatgaagcttttcctgatgacgagtgtgtggaaagccgt
gactaaatgtggtggatcctttgtcaacgcaggaaataatatacgctacaggaagtctatagaactgttagaccggtaca
tcatcaggtcaaagataatttattgggatgagaaagcgttttatgtgaatcaacatttcatacgtgcaagagacaacttt
atatgtgccgtaaacatagcaaagatggccaccatagggactacacctgccaatattataaggacattggaagggaggga
cattcccccacccaccccaggaccggaattaatcaaacttatggaatcatggcagctttccagtgaaaatctcaggaaga
attcctga

Protein
Protein IDpfu_aug1.0_7719.1_09622.t1
Definition-
>pfu_aug1.0_7719.1_09622.t1
MNNSRYLRECDFGRMKLFLMTSVWKAVTKCGGSFVNAGNNIRYRKSIELLDRYIIRSKIIYWDEKAFYVNQHFIRARDNF
ICAVNIAKMATIGTTPANIIRTLEGRDIPPPTPGPELIKLMESWQLSSENLRKNS

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