Gene
| Gene Model ID | pfu_aug1.0_7719.1_09623 |
|---|---|
| Locus | scaffold7719.1 : 76469 ... 80725 : - |
| To GenomeBrowser | scaffold7719.1:76469..80725 |
| Genes list of scaffold | scaffold7719.1 |
| Synonym | pfu_aug2.0_1955.1_18609 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_7719.1_09623.t1 | 4 | 1 | zf-C2H2_4 | 297 | 319 | 9.4e-08 | 31.8 | 0.001 | 2.6 | 8.5 |
| pfu_aug1.0_7719.1_09623.t1 | 4 | 1 | zf-H2C2_5 | 297 | 319 | 4.6e-06 | 26.5 | 0.00035 | 0.87 | 9.9 |
| pfu_aug1.0_7719.1_09623.t1 | 4 | 2 | zf-C2H2_4 | 373 | 394 | 9.4e-08 | 31.8 | 4.1e-06 | 0.01 | 16.1 |
| pfu_aug1.0_7719.1_09623.t1 | 4 | 2 | zf-H2C2_5 | 373 | 394 | 4.6e-06 | 26.5 | 3.1e-07 | 0.00075 | 19.5 |
| pfu_aug1.0_7719.1_09623.t1 | 4 | 3 | zf-C2H2_4 | 400 | 422 | 9.4e-08 | 31.8 | 5.4e-06 | 0.013 | 15.7 |
| pfu_aug1.0_7719.1_09623.t1 | 4 | 3 | zf-H2C2_5 | 402 | 422 | 4.6e-06 | 26.5 | 0.00017 | 0.41 | 10.9 |
| pfu_aug1.0_7719.1_09623.t1 | 4 | 4 | zf-C2H2_4 | 428 | 450 | 9.4e-08 | 31.8 | 0.0047 | 12.0 | 6.5 |
| pfu_aug1.0_7719.1_09623.t1 | 4 | 4 | zf-H2C2_5 | 430 | 450 | 4.6e-06 | 26.5 | 0.17 | 430.0 | 1.4 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_7719.1_09623.t1 | gi|260814490|ref|XP_002601948.1| | hypothetical protein BRAFLDRAFT_86432 [Branchiostoma floridae] | 2.0e-11 |
Transcript
| Transcript ID | pfu_aug1.0_7719.1_09623.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_7719.1_09623.t1 atggaagtcagactgctgtctcaacaagaggagaaatttgccttgtttgtagagaacatactcagacatgggaaggaatt gtcaaccaacgaccttggtgaccttcagcaggaggctgctcatagtaaccatggtgataatcaacatgaatccacaaata accatggaaacatagatcagaatgttcacagtaactatgctaacagccaacaggaagtgttgtttagtaaccttggcgta aaagaagaggtcacagaacatcaccatggcaacaaacaactggaaggcatcgatactgccattgacttgagtaagaaaac agttgatgaaagacatataataaagggcagccaaaatgatacacataaaggaggcagtaacattaatgtgaaagaggctt tgttaaaaaagttatgcaaagatcgggagaaaaaatatagcatgtcaagtcaacgtaatattagtgatggaaggaaccaa cgtccacaggagcccatactagatcattcttatatcagcatgtcaaaaaggtataatgatatcaaagatgatctaaaaga actaaagaactttgtagtagaagaccatcacaacctgtcaaacggtaaaagaaaacatgatcaggatatgaatgaagatt ctaagaatgttgtgcagaatacagatgatacatcccttgattcattgcagaaaatggatgatacttcccaagattcagta cagaaaatggaagagtcatctctggattatgagggagaggacgttggttctatggatgccatgcaggattctgaacagct tgagagcaaagtcaaacggaatgctgcggaaacggtagacttacagagtatgacacagcagatgaagaagaaaaaaggtc aaatgcactataaatgtaatatatgtgggtatggaacaaacagctataagctccataagagacataaaaacactcataag gagccgcaacatataacaagggccgtaactcagagtaatagaaaggaggagaacgttaagaaaactcctgtcgtcgaaaa aaagaagaagaagacaacaagtaccagatattgtagaaaaattaaaccagaagtagcggtaccagagaaaaagctcaggt gtgacaaatgtcagttcagaacagacagtgaagagaaactaaaaaggcatatgactgtacatcaatcaccagattctttt gtctgtgggatttgtaattttaaatgtaggacaaaaacgggacttggacgtcatcttaagaaacacagagaagaaatgcc gtggatttgtcagatctgtcattaccaagcccacgatgagttcagtctcaacctccatatgaaatcacattctacggggg aaatggatgatagtaacgccaacaaaaaataccacagaatcttacagttttttgtgtacaaagtttag |
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Protein
| Protein ID | pfu_aug1.0_7719.1_09623.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_7719.1_09623.t1 MEVRLLSQQEEKFALFVENILRHGKELSTNDLGDLQQEAAHSNHGDNQHESTNNHGNIDQNVHSNYANSQQEVLFSNLGV KEEVTEHHHGNKQLEGIDTAIDLSKKTVDERHIIKGSQNDTHKGGSNINVKEALLKKLCKDREKKYSMSSQRNISDGRNQ RPQEPILDHSYISMSKRYNDIKDDLKELKNFVVEDHHNLSNGKRKHDQDMNEDSKNVVQNTDDTSLDSLQKMDDTSQDSV QKMEESSLDYEGEDVGSMDAMQDSEQLESKVKRNAAETVDLQSMTQQMKKKKGQMHYKCNICGYGTNSYKLHKRHKNTHK EPQHITRAVTQSNRKEENVKKTPVVEKKKKKTTSTRYCRKIKPEVAVPEKKLRCDKCQFRTDSEEKLKRHMTVHQSPDSF VCGICNFKCRTKTGLGRHLKKHREEMPWICQICHYQAHDEFSLNLHMKSHSTGEMDDSNANKKYHRILQFFVYKV |
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