Gene
| Gene Model ID | pfu_aug1.0_7724.1_02485 |
|---|---|
| Locus | scaffold7724.1 : 47 ... 6254 : + |
| To GenomeBrowser | scaffold7724.1:47..6254 |
| Genes list of scaffold | scaffold7724.1 |
| Synonym | pfu_aug2.0_13582.1_09854 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_7724.1_02485.t1 | 2 | 1 | LRR_8 | 230 | 274 | 5.6e-07 | 29.2 | 4.6e-07 | 0.0034 | 17.0 |
| pfu_aug1.0_7724.1_02485.t1 | 3 | 1 | LRR_4 | 240 | 281 | 4.2e-07 | 29.4 | 1.7e-06 | 0.012 | 15.1 |
| pfu_aug1.0_7724.1_02485.t1 | 3 | 2 | LRR_4 | 315 | 351 | 4.2e-07 | 29.4 | 3.8e-06 | 0.028 | 14.0 |
| pfu_aug1.0_7724.1_02485.t1 | 2 | 2 | LRR_8 | 315 | 367 | 5.6e-07 | 29.2 | 3.5e-06 | 0.026 | 14.2 |
| pfu_aug1.0_7724.1_02485.t1 | 3 | 3 | LRR_4 | 336 | 368 | 4.2e-07 | 29.4 | 4.1e-08 | 0.0003 | 20.3 |
Transcript
| Transcript ID | pfu_aug1.0_7724.1_02485.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_7724.1_02485.t1 atgataacaaacctatcccgcacactgcctgactggctcagtgggtatggtttcaacaactacgtggatcaagccttcgc tttcctgcccagtgatctcggcaaaaatactctactctatcctaaactaaacgacatgttcaaagatgtctcagtccatc gtctctgctcatttgcagatcagctattacatttccaaccgacaaagaaagtaagtttacagattccgattcactttatg gacatggcgggcatgaagcccagtgggctacctcccgtggatctgacgtatgcctgcttgtatcagggctggatttacac atccctcatcgcaaacaaggttgagcacctgctatatcaactgatacagccttatgcttcaatttgtaacattctggctg cacagcatagtggtctacagaaccagaaaaatcctgctaacggcacagacaaggtcaaggaactgatcaaggatgtagaa gaacaacccgtcaaattcaaaggaaaacctgttgcagaatcccataaactgatcaaaagtcaacgtctctatacttgcaa agcccaccatcttgctttatctggaaatatatcaatttacgatgagactctcacaatggaaaatgagtatttccatccat actcggagcttgtgaatgctttctcttgggatcttcccactttaccatccatacctaaggacatgttcacaatgttacca aatctgcaatatttctcactggaatcttgtgaactcaaggatgatcctaatttcccagagggcattagaaatctttcaaa gttggagaacattgtattaaacaaattaggcattacaaaattgccgaaggatatcctgctaggaaaaagcttgaaaaatg tggaatgcaaaaatatggctgtgaagtccttgagaatcgagtggccttcaacttcaatgataaggtccctgtctttgtcc ggacttctgattgacaaggttcccataggaatatgtcatcttcgggaattgacgaacttgaatcttgactataacccact ttccacacttcccaatgagttgtgtcatctcagcaaactaagagtgctctcccttagaggtcagcttttatatcgtacat gtattttgtaa |
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Protein
| Protein ID | pfu_aug1.0_7724.1_02485.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_7724.1_02485.t1 MITNLSRTLPDWLSGYGFNNYVDQAFAFLPSDLGKNTLLYPKLNDMFKDVSVHRLCSFADQLLHFQPTKKVSLQIPIHFM DMAGMKPSGLPPVDLTYACLYQGWIYTSLIANKVEHLLYQLIQPYASICNILAAQHSGLQNQKNPANGTDKVKELIKDVE EQPVKFKGKPVAESHKLIKSQRLYTCKAHHLALSGNISIYDETLTMENEYFHPYSELVNAFSWDLPTLPSIPKDMFTMLP NLQYFSLESCELKDDPNFPEGIRNLSKLENIVLNKLGITKLPKDILLGKSLKNVECKNMAVKSLRIEWPSTSMIRSLSLS GLLIDKVPIGICHLRELTNLNLDYNPLSTLPNELCHLSKLRVLSLRGQLLYRTCIL |
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