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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_7724.1_02486
Locus scaffold7724.1 : 6976 ... 18712 : +
To GenomeBrowser scaffold7724.1:6976..18712
Genes list of scaffold scaffold7724.1
Synonym pfu_aug2.0_1185.1_18162

Manual annotation
Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug1.0_7724.1_02486.t1 1 1 Miro 80 198 1.5e-12 48.0 1.6e-15 3.0e-12 47.0
pfu_aug1.0_7724.1_02486.t1 1 1 Ras 80 214 2.2e-10 40.1 1.8e-13 3.4e-10 39.5

Transcript
Transcript IDpfu_aug1.0_7724.1_02486.t1
Definition-
>pfu_aug1.0_7724.1_02486.t1
atgaacctgtacaatgagtatgactccaatgctaacgccatgctggaactcaaggaactggctcagcttaacctcaaact
cttctttgacattccaagacttggtttccaaggtataaacttacacagttgcccatctttgagaaccccaccaaatgaag
tcgtcagtcgtggatttgagtctgtcagggcttatctgaaacgtctcgctggaggattcactgaatgtcgtagaacaaaa
ctaatgtttgtcggcttaggagaagctggaaaaactagcttactgcaagctcttatgagtggctccaagaagacgactgg
tacccagaatgctcagctaacagacggtatcgagattaagacatggactataaaagacgacaaaggaaatgatatcatct
tcagtgcctgggactttgctggacagactgtgtattacaacactcaccagtttttcctgtctaaccgtgctgtgtacatg
ttactttggaacatgaggatgggcttcgagcacgcaggtctggatttctggctgagttctatcgcttgtcacgctccaga
aactccaatcattattattggtacccagtctgatcaggtaccaaagcctgagatacctgaaaaagatctcagaaggagat
atcctcagatctcggctttccattatgtcagctctatcaccggagatggtatacctgaccttgagaagacacttttagat
gtcaccttgaagcagaaatatatgggagagaaagtaccccaagtctggcttaacttggaaaagaaaatacttgctgagcg
gacaaagcagagcattttggattggtctatggttagagactttgctatagagcaaggaatctacgatgataacgatgtta
aacaggccattaagtttctggatgatctgggtacagtacaatactttgacaatgatttcctcagggagaaggtggtcatc
aacccacagtggattgttaacgtcatggcttgtgtagtctctgtcaagaaatcacctatacaggagaatgatgggagatt
ttaccataaccacatcaaggatatatggggaaagtatgacatatccttacacaattggctgctgagccttacagaggagt
ttgacttgaccttcccattgcctggaaatccaataaatgtggtgccatgcctactgccaatggaaccacctgctgagata
gcagtagcctgtgtgtccgacagctttgagagagacccgcagtgtaacaccatgtttatatacgcaaaggaacagctgat
gaaatctatcgttatttgtgttatcagggagagtatgatgtggcagaacactgacctcggcatgaaaataggtcaaccga
aaatgtcaatgttgaagacagtgaagaggtatgacctgaagttacccgaccttaaaggtattgtggaggaatacatcgct
ggtactgtcaagggtaactcagagcaccctgatgtatttataagctactgttgggcaaactcaaaggatgcctgttccca
ggggacgcaatctaagcccggctctctgggctttggtgacccaagagagatcaagagctttttagaaaaccatggtatca
agtgctggctagacattgaacaaatgggaaagttgaccgcacagtgcacagcaactaacagcatgactttaagaaaacat
tag

Protein
Protein IDpfu_aug1.0_7724.1_02486.t1
Definition-
>pfu_aug1.0_7724.1_02486.t1
MNLYNEYDSNANAMLELKELAQLNLKLFFDIPRLGFQGINLHSCPSLRTPPNEVVSRGFESVRAYLKRLAGGFTECRRTK
LMFVGLGEAGKTSLLQALMSGSKKTTGTQNAQLTDGIEIKTWTIKDDKGNDIIFSAWDFAGQTVYYNTHQFFLSNRAVYM
LLWNMRMGFEHAGLDFWLSSIACHAPETPIIIIGTQSDQVPKPEIPEKDLRRRYPQISAFHYVSSITGDGIPDLEKTLLD
VTLKQKYMGEKVPQVWLNLEKKILAERTKQSILDWSMVRDFAIEQGIYDDNDVKQAIKFLDDLGTVQYFDNDFLREKVVI
NPQWIVNVMACVVSVKKSPIQENDGRFYHNHIKDIWGKYDISLHNWLLSLTEEFDLTFPLPGNPINVVPCLLPMEPPAEI
AVACVSDSFERDPQCNTMFIYAKEQLMKSIVICVIRESMMWQNTDLGMKIGQPKMSMLKTVKRYDLKLPDLKGIVEEYIA
GTVKGNSEHPDVFISYCWANSKDACSQGTQSKPGSLGFGDPREIKSFLENHGIKCWLDIEQMGKLTAQCTATNSMTLRKH

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