Gene
| Gene Model ID | pfu_aug1.0_7753.1_60290 |
|---|---|
| Locus | scaffold7753.1 : 1 ... 17065 : - |
| To GenomeBrowser | scaffold7753.1:1..17065 |
| Genes list of scaffold | scaffold7753.1 |
| Synonym | pfu_aug2.0_139.1_30271 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_7753.1_60290.t1 | 2 | 1 | HMGL-like | 49 | 92 | 2.0e-29 | 102.9 | 0.27 | 510.0 | 0.1 |
| pfu_aug1.0_7753.1_60290.t1 | 1 | 1 | CPSase_L_chain | 52 | 161 | 3.00004e-41 | 139.9 | 6.86636e-44 | 1.3e-40 | 137.9 |
| pfu_aug1.0_7753.1_60290.t1 | 2 | 1 | ATPgrasp_Ter | 79 | 233 | 6.3e-11 | 41.5 | 1.3e-13 | 2.4e-10 | 39.6 |
| pfu_aug1.0_7753.1_60290.t1 | 1 | 1 | CPSase_L_D2 | 167 | 239 | 4.5e-16 | 58.7 | 4.3e-19 | 7.9e-16 | 57.9 |
| pfu_aug1.0_7753.1_60290.t1 | 2 | 2 | HMGL-like | 251 | 457 | 2.0e-29 | 102.9 | 6.2e-32 | 1.1e-28 | 100.4 |
| pfu_aug1.0_7753.1_60290.t1 | 2 | 2 | ATPgrasp_Ter | 424 | 446 | 6.3e-11 | 41.5 | 0.48 | 880.0 | -1.7 |
| pfu_aug1.0_7753.1_60290.t1 | 1 | 1 | PYC_OADA | 498 | 690 | 0.0 | 230.5 | 0.0 | 0.0 | 229.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_7753.1_60290.t1 | gi|195426988|ref|XP_002061562.1| | GK20962 [Drosophila willistoni] | 0.0 |
Transcript
| Transcript ID | pfu_aug1.0_7753.1_60290.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_7753.1_60290.t1 atgctgcgtttacaggcgcggctgtcgtcgctgtgccatggggccagggccaagatgccggatgctgcccgctctaagac tcagtatggctacaatctgcccccagggatgggacggtattcatcgtcacaaccccaggccaaacctgacgagaaaatcc aaaaacttctggtggctaatagaggtgagattgccattcgagtgttccgtgcatgcacggagatgaacattcggacagtg gctatatactcagagcaggacaagatgcatatgcataggcagaaagcagatgagtcatacctcatagggaaaggacttcc ccctgtagcagcgtatctcaacattccagaaatcatccaaattgctaaggagaatgacgtagatgcagtgcatcctgggt atggattcctgtccgagaggtcggattttgctgaggcgtgtaccgatgccggcatcaagtttataggaccttcagctgag gtcgtgtataaaatgggggacaaggtagaagctagaaaggctgccattgaagcaggtgtacaggtagtacctggtacaga tggaccagttgaggacgttgagcaggctcggtatttctgtgaacaatacggtcttcctgtgatatttaaggctgcctatg gagggggaggaagaggaatgaggattgtgaggaatatggagcttgtgtataaagccatagacaatgattttacagaaggc gaggatattttggatggagccacatttgacgttgccatgcgttttctccatgagtgtccgtgggagaggttacagcagtt acgagagcagatacctaatgtaccgttccagatgttactgaggggggctaatgccgtaggatacactaactacccagata atgtcgtatacaaattttgtgatttagccgtaaaacatggtatggacattttccgtatatttgactcgctcaattatttc cctaacatcaaagttggcatggaggctgttggcaatgcaggtggtgttattgaggcagccatatcttatactggtgatgt atcagaccctatggcctctaagtatacattacagtactatgaggatctagccacagaactagtgaaggccggcacacaca tcctgggtattaaggacatggctggagtgttaaagccacgagcagccaaaatgttgattggagcactgagggacaggttc ccagacatccccatccacgtacatacccatgacacggcgtgtgcgggagtggcatccatgctggcatgtgccgaagcagg tgccgatgtagtggatgttgccgtggattctatgtcgggattaacgtcacagcccagtatgggagccgttgtggcagcac ttcagagaacagaacttgatacaggaatccagttatcagatgtgacaaactattctgcctattgggaacagaccagaaac ttgtacgctccgttcgaatgctgtaaaacgctcaaaagtggaaactctgatgtatacatcaatgaaatcccaggtggaca gtacactaacctacagttccaagctttcagtctgggattggctgaccagtttgaagaagtcaagaagatgtatgctgaag caaataaactactgggggacgtgccaaaggtgactccatcatcaaaggtcgtgggtgacatggcccaatttatggtgcag aacaaactgaatgccaaaatggtagaagagagagtggaggagttgtctttccctgtttctgttgtcgagtactttcaagg ttatctaggtcagccaccagggggctttccagaaccattacgtacaaagattttgaaagggaaagaaagaatcgagggtc gagcaggtgagtctctcccaccaatagactttgaagggctgaaggagagcctggaggaacgtcacgggaacatcattcgg gaggtggacgtgatgagctcggcattgtatcctaaagtcacggatgatttcctagaattcagagagaagtatggacctgt agatgcactggacaccaaaatgttctttgttggaccaaaaatggcacaagaagtagaggtaagattcagcagttgccgta aataa |
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Protein
| Protein ID | pfu_aug1.0_7753.1_60290.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_7753.1_60290.t1 MLRLQARLSSLCHGARAKMPDAARSKTQYGYNLPPGMGRYSSSQPQAKPDEKIQKLLVANRGEIAIRVFRACTEMNIRTV AIYSEQDKMHMHRQKADESYLIGKGLPPVAAYLNIPEIIQIAKENDVDAVHPGYGFLSERSDFAEACTDAGIKFIGPSAE VVYKMGDKVEARKAAIEAGVQVVPGTDGPVEDVEQARYFCEQYGLPVIFKAAYGGGGRGMRIVRNMELVYKAIDNDFTEG EDILDGATFDVAMRFLHECPWERLQQLREQIPNVPFQMLLRGANAVGYTNYPDNVVYKFCDLAVKHGMDIFRIFDSLNYF PNIKVGMEAVGNAGGVIEAAISYTGDVSDPMASKYTLQYYEDLATELVKAGTHILGIKDMAGVLKPRAAKMLIGALRDRF PDIPIHVHTHDTACAGVASMLACAEAGADVVDVAVDSMSGLTSQPSMGAVVAALQRTELDTGIQLSDVTNYSAYWEQTRN LYAPFECCKTLKSGNSDVYINEIPGGQYTNLQFQAFSLGLADQFEEVKKMYAEANKLLGDVPKVTPSSKVVGDMAQFMVQ NKLNAKMVEERVEELSFPVSVVEYFQGYLGQPPGGFPEPLRTKILKGKERIEGRAGESLPPIDFEGLKESLEERHGNIIR EVDVMSSALYPKVTDDFLEFREKYGPVDALDTKMFFVGPKMAQEVEVRFSSCRK |
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