Gene
| Gene Model ID | pfu_aug1.0_7763.1_24276 |
|---|---|
| Locus | scaffold7763.1 : 1306 ... 13583 : + |
| To GenomeBrowser | scaffold7763.1:1306..13583 |
| Genes list of scaffold | scaffold7763.1 |
| Synonym | pfu_aug2.0_7.1_23215 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_7763.1_24276.t1 | 2 | 1 | Fra10Ac1 | 68 | 68 | 6.8e-20 | 71.3 | 0.13 | 2000.0 | -1.2 |
| pfu_aug1.0_7763.1_24276.t1 | 2 | 2 | Fra10Ac1 | 106 | 160 | 6.8e-20 | 71.3 | 4.6e-24 | 6.8e-20 | 71.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_7763.1_24276.t1 | gi|291227927|ref|XP_002733934.1| | PREDICTED: protein FRA10AC1-like [Saccoglossus kowalevskii] | 8.96831e-44 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| egg-4cell | 1 |
| >Adult tissues | |
Transcript
| Transcript ID | pfu_aug1.0_7763.1_24276.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_7763.1_24276.t1 atgaaagatggatttttaagtgaaaatgataacattcacaatgcaggtggttatgggtctgaatttgaatatgacagtga agtagagaggagacggaaaaagcagacagatttgatttcaaagaagaagcgtacaacagatggtgttgggcatagaaaag agctggaagatgagtatgacaaggaggaagggaaaatacaacgttaccagatccttagcatggatgcttatgccaggcat aaaaagtttattaatgactacatgctgtattatggcggatcaaaaacagaattcaagagagactcatctcgagataagac agatatggatgttatcagagaaaatcacaggtttctgtggacggaggatgatgaagaagaaagttcttgggagaaaaccc tagcaaagaaatattatgataagttgttcaaggaatactgtattacagatctcagtaggtacaaggaaaataagataaat caccaaaatcctccagtacatctagtcagaaagaaccatcctcctcctcctcaaaaacagaagatacagagaagtcaata tggagtggtccagcgaaaataa |
|
Protein
| Protein ID | pfu_aug1.0_7763.1_24276.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_7763.1_24276.t1 MKDGFLSENDNIHNAGGYGSEFEYDSEVERRRKKQTDLISKKKRTTDGVGHRKELEDEYDKEEGKIQRYQILSMDAYARH KKFINDYMLYYGGSKTEFKRDSSRDKTDMDVIRENHRFLWTEDDEEESSWEKTLAKKYYDKLFKEYCITDLSRYKENKIN HQNPPVHLVRKNHPPPPQKQKIQRSQYGVVQRK |
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