Gene
| Gene Model ID | pfu_aug1.0_7763.1_24277 |
|---|---|
| Locus | scaffold7763.1 : 14139 ... 36783 : - |
| To GenomeBrowser | scaffold7763.1:14139..36783 |
| Genes list of scaffold | scaffold7763.1 |
| Synonym | pfu_aug2.0_7.1_23216 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_7763.1_24277.t1 | 2 | 1 | Cpn60_TCP1 | 30 | 184 | 0.0 | 406.9 | 0.0 | 4.90454e-43 | 147.4 |
| pfu_aug1.0_7763.1_24277.t1 | 2 | 2 | Cpn60_TCP1 | 183 | 444 | 0.0 | 406.9 | 0.0 | 0.0 | 263.0 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_7763.1_24277.t1 | gi|28277344|gb|AAH45074.1| | Cct7-prov protein, partial [Xenopus laevis] | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| egg-4cell | 1 |
| 8-16cell | 1 |
| egg-Dshape | 1 |
| trochophore | 1 |
| >Adult tissues | |
| Dshape | 1 |
Transcript
| Transcript ID | pfu_aug1.0_7763.1_24277.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_7763.1_24277.t1 atcatcctggtgctttcggttcgtcgatgtgcttcggttctgaagaagtttgtcaaggaaggcaaatactcagatacttt tacacttgcaggaaaagctgtaatatcaaatgatggtgccaccattttaaagaccctagatatagtccacccagcagcta agacactagtagatattgccaagtcacaagatgctgaggtgggagatgggactacctcggttgtattacttgcaggagag tttctgaagcaagcaaaaccgtttgttgaggaaaatgtccatccacaaatcatcatcagagctttcagaagagctgtaaa tatgctagttcaaaaaattcaggagatctcagttaaaatttctaaagatgataaaaatgaacagaaagaattgctacaga agtgtgctgccactacacttagttctaagctggtagctcatcagaaagatttcttctccaagatggtggtagatgctgtt ggattattagacgaccttttacctttgaacatgataggagtaaagaaagtaacaggaggtgccctagaggaataccaatc aatagtagatgcggaatggaagatactatacgacaagctagagaaaatccaccagagtggtgccaaagtagtattatcta aactccccatcggagatgtggccacacagtactttgctgatagggacatgttttgtgctggccgagtaccagaagaagat ctgagaagaaccatgaaagcttgtggaggctcgatacaaacaacaacacaaagtctgactgacgatgtactgggcaagtg tcagctgttcgaagaaacacagataggaggtgataggtataactttttcaatggttgtccacaagccaaaacatgtacca tcattttgagaggtggagcagaacaattcatagaggaaacagaacgatcattacatgatgccatcatgattgtacgacga gcaatgaaaaacgatgcggtcgtagctggtggaggagcaatagaaatggaacttagtaaatatctgagagatttttcacg gacaattgcgggtaaagaacaactaatgattggggccatggccaaggcattggaggtcattccaagacaattatgtgata atgctggattcgatgctacaaacatactgaataaactcagacagaaacattcggaagctggattgtggtacggtgttaat ataatgaatgaagatatagcggacaattttgaagactgtgtatgggagcctgctatagttaaaattaatgctcttaccgc cgcagtggaagctacgtgtttaatattatctgtggacgagaccattaaaaatccaaaatctgggggagaggccccaggag gcgggggaatgggacgtggaaggggaagacctatgtaa |
|
Protein
| Protein ID | pfu_aug1.0_7763.1_24277.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_7763.1_24277.t1 IILVLSVRRCASVLKKFVKEGKYSDTFTLAGKAVISNDGATILKTLDIVHPAAKTLVDIAKSQDAEVGDGTTSVVLLAGE FLKQAKPFVEENVHPQIIIRAFRRAVNMLVQKIQEISVKISKDDKNEQKELLQKCAATTLSSKLVAHQKDFFSKMVVDAV GLLDDLLPLNMIGVKKVTGGALEEYQSIVDAEWKILYDKLEKIHQSGAKVVLSKLPIGDVATQYFADRDMFCAGRVPEED LRRTMKACGGSIQTTTQSLTDDVLGKCQLFEETQIGGDRYNFFNGCPQAKTCTIILRGGAEQFIEETERSLHDAIMIVRR AMKNDAVVAGGGAIEMELSKYLRDFSRTIAGKEQLMIGAMAKALEVIPRQLCDNAGFDATNILNKLRQKHSEAGLWYGVN IMNEDIADNFEDCVWEPAIVKINALTAAVEATCLILSVDETIKNPKSGGEAPGGGGMGRGRGRPM |
|