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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_7764.1_60297
Locus scaffold7764.1 : 36178 ... 39825 : -
To GenomeBrowser scaffold7764.1:36178..39825
Genes list of scaffold scaffold7764.1
Synonym NA

Manual annotation
Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug1.0_7764.1_60297.t1 1 1 Xan_ur_permease 4 99 2.1e-21 75.8 3.4e-25 2.5e-21 75.6

Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug1.0_7764.1_60297.t1 gi|301615305|ref|XP_002937113.1| 3.0e-25

Transcript
Transcript IDpfu_aug1.0_7764.1_60297.t1
Definition-
>pfu_aug1.0_7764.1_60297.t1
atgataccgacttttataagaagagttgctgcggggaccaactttcatgttggcagcagacaagtattcgtcctggtagc
agttatttatatcgtctttggaattgtcggaaagttttctgcagtgttcatcaccattccacatccggtgttgggtgggg
ccctgatcacgatgtttgggatgtttataggagtcgttctgtccaaccttcagtacgtctgtctcaagtccaccagaaat
atcgctattatcggcatatctatattggtaggactcgtggtgccgtactgggtggaattacgcccggatgtcacatttac
aggagatgatgataaggaccgaattataagaacaattctaggtaatgccaatctgacgggggcggtgctagcttgtttcc
ttgacaacacgttgccaggtataggtatttcttttcatggaaatcggaatcgaaagaattag

Protein
Protein IDpfu_aug1.0_7764.1_60297.t1
Definition-
>pfu_aug1.0_7764.1_60297.t1
MIPTFIRRVAAGTNFHVGSRQVFVLVAVIYIVFGIVGKFSAVFITIPHPVLGGALITMFGMFIGVVLSNLQYVCLKSTRN
IAIIGISILVGLVVPYWVELRPDVTFTGDDDKDRIIRTILGNANLTGAVLACFLDNTLPGIGISFHGNRNRKN

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