Gene
| Gene Model ID | pfu_aug1.0_7784.1_24285 |
|---|---|
| Locus | scaffold7784.1 : 4828 ... 10575 : - |
| To GenomeBrowser | scaffold7784.1:4828..10575 |
| Genes list of scaffold | scaffold7784.1 |
| Synonym | pfu_aug2.0_433.1_10771 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_7784.1_24285.t1 | 2 | 1 | NACHT | 61 | 230 | 4.1e-12 | 46.0 | 1.1e-15 | 1.6e-11 | 44.1 |
| pfu_aug1.0_7784.1_24285.t1 | 2 | 2 | NACHT | 429 | 454 | 4.1e-12 | 46.0 | 0.38 | 5600.0 | -3.2 |
Transcript
| Transcript ID | pfu_aug1.0_7784.1_24285.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_7784.1_24285.t1 atgacacctttccgtgatgacttgaagatgccggttgaacaattgtacgcttcagttgttatcagagaggacatgaagta taacagtagaaaacgagggtttgctggaaattgggaaaaacacaaaaagaaaactgtaaaaagtccaggtgatctgcttt atgtagatggaaaatatgccagacggatatacatgcaaggggatgctgctagaggtaaaacaacatactgcctatggttg ttgaatcaatggtgtgatgctaaaaggaatacagatatatttcaaaatgaatggcaaagagcaatgaacgaatttgattt tgcattttacatacctctgcgatctgtccagcaatcaagaattacagtggcggatatgatatgtaaggatgtattacacg aataccctaacctgcatcaaacaacagagcatatattattcaacgagaaatataaatgcctcatacttattgacgggttg gatgaatggaatcaggaggatcaagatattcaaaaactcagatgcaagtctttaccaaactttgatgggatattgaattg tgtatatcttattacaatgcggccaatgagattcaatgctgttgcccaatctattcaaaataatgacaaagtgatcgaaa tgagaggacttaatagaagaggaattagaaaagtaataaagaacgtactgataaatcatttcggactgattcacaaatct cagaaatataggataagatatcgtgaaattgacgattttttgagcggaccaacacttgattcttttgttcagatccctat cgttgctgttatgtgtgttcagataaaatataaaagactatgtgagccgaatagcatgacaggtttctttgctgttatga tagatatgataattgaaagagcatgtcaaaaggataataaattgcattcccctgaaccacaagttgacgcgagcttacca aaaccattgtctgaatacgaaaatattaaaaagtattatgggatccttttaaaattaggtaaagtggcatacgaaggtat tatgaataaacaacaaaaacttctattcaaagaaggaaagttagataaagagatcagaatggaagagttacagtttgctc tagatgcaggattgataagtcagagggataaatcaactgaaatatcgaagaatgtacaaattgagttcttccactcatct attcaggaatacctggctaccatttatatcatgtctagggaagagataaaaaaatcattctgctctaatctgatcaatga caaaaatttaagtgaactacacaatatcattatgtttattttcggattgtgtccatcacttggaagcgctgtgacagaac aactattcagtctcgtaaatgatataagtcacagcaatgaacttccatactccgaagacagtttagtttttctgatgata tggtaccagattgaagtcagttggtacagagagttatttgcaacaacagaaaagactatgatgacatttaaagtattgtt catgtatctgtcaaaacactctgatcaagaggaagtggaagttacaaaaagaatcctggttgatgataatatccttataa agttcatgttttttgattccgtacctgcggatggagaatgctgcatcactgacaaagagctgaatgtattcttagctaac tcagagaggattaattccttgtggaccctccaaatatgtggtcgttcaacagaccgatccatccacacgatatctggaag ttctattgagaatctggttttatctgatgtaaaggtatccaaaatggatgataatgaggttgaatgccctccacttctag gcgatttgccaaaactcatccgtttaagactagcaaatattagcttaaatgacgggaaacttggtttctcatctgaaatg atctctttaaggtatatatggtttcgatgtgtcaatatgtcagtttcagaatggcaattattcattagaattttatcaga tgaagaacggagaatagatgttaagttataccatacaaatatcgacgaaagctctatagaaatagtcaaatcatctccga agttcgaagaaagaaagaaagacatgaataagctattcttcgtaagaaaatgtccaacgccacaagcttcttctgatgca aacgatcgtgatcatctagctgaatacatagacctctatgtagagagtgattgcaatttatatagcgacgatagtttgga tactgacgacgacgatgatgatgcctataatgaagatggcgatgatgatggcgacgactatggtgatgatgatgatggcg acgacaatggtgatgatgatgatgatggcgacgactatggtgacgatgatgatggcgacgactatggtgacgatgatgat ggcgacgactatggtgatgatgatgatggcgacgacaatntttttttatatcacaaattcgaattttttgatatcacaaa ttccaccatatttatgatatcacaaattccatttttttga |
|
Protein
| Protein ID | pfu_aug1.0_7784.1_24285.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_7784.1_24285.t1 MTPFRDDLKMPVEQLYASVVIREDMKYNSRKRGFAGNWEKHKKKTVKSPGDLLYVDGKYARRIYMQGDAARGKTTYCLWL LNQWCDAKRNTDIFQNEWQRAMNEFDFAFYIPLRSVQQSRITVADMICKDVLHEYPNLHQTTEHILFNEKYKCLILIDGL DEWNQEDQDIQKLRCKSLPNFDGILNCVYLITMRPMRFNAVAQSIQNNDKVIEMRGLNRRGIRKVIKNVLINHFGLIHKS QKYRIRYREIDDFLSGPTLDSFVQIPIVAVMCVQIKYKRLCEPNSMTGFFAVMIDMIIERACQKDNKLHSPEPQVDASLP KPLSEYENIKKYYGILLKLGKVAYEGIMNKQQKLLFKEGKLDKEIRMEELQFALDAGLISQRDKSTEISKNVQIEFFHSS IQEYLATIYIMSREEIKKSFCSNLINDKNLSELHNIIMFIFGLCPSLGSAVTEQLFSLVNDISHSNELPYSEDSLVFLMI WYQIEVSWYRELFATTEKTMMTFKVLFMYLSKHSDQEEVEVTKRILVDDNILIKFMFFDSVPADGECCITDKELNVFLAN SERINSLWTLQICGRSTDRSIHTISGSSIENLVLSDVKVSKMDDNEVECPPLLGDLPKLIRLRLANISLNDGKLGFSSEM ISLRYIWFRCVNMSVSEWQLFIRILSDEERRIDVKLYHTNIDESSIEIVKSSPKFEERKKDMNKLFFVRKCPTPQASSDA NDRDHLAEYIDLYVESDCNLYSDDSLDTDDDDDDAYNEDGDDDGDDYGDDDDGDDNGDDDDDGDDYGDDDDGDDYGDDDD GDDYGDDDDGDDNXFLYHKFEFFDITNSTIFMISQIPFF |
|