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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_78042.1_56561
Locus scaffold78042.1 : 1 ... 705 : -
To GenomeBrowser scaffold78042.1:1..705
Genes list of scaffold scaffold78042.1
Synonym pfu_aug2.0_16021.1_06561

Manual annotation
Study fieldTranscription Factors
Gene namePfu-Mlx-related2
DescriptionBest hit to AAG34121 MondoA [Homo sapiens] by a BLASTP search against NCBI Homo sapiens nr database. We could not retrieve a bHLH domain, and therefore this gene is not included in the bHLH annotation paper.
mRNA evidence

Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug1.0_78042.1_56561.t1 gi|292614351|ref|XP_001338503.2| 1.0e-12

Transcript
Transcript IDpfu_aug1.0_78042.1_56561.t1
Definition-
>pfu_aug1.0_78042.1_56561.t1
atgatggcaatagagagagagcaatctgacaatccccactcgtccggtgacatcgagggaaaggatgacaagtacatcca
cagtggacatttcatgattagtcgagtccatgataaaaacttggtagacgatgacgacggttcagacgatgacgatgtga
atccgtctgatttcgatgtccagggatacaattttgaagatgcaaacaaacaaactacagattcataccagtttggcagt
cgaagctcgcacactctggcaatagatgcttcccttacaaaactatttcagtgcatgactttagcttatag

Protein
Protein IDpfu_aug1.0_78042.1_56561.t1
Definition-
>pfu_aug1.0_78042.1_56561.t1
MMAIEREQSDNPHSSGDIEGKDDKYIHSGHFMISRVHDKNLVDDDDGSDDDDVNPSDFDVQGYNFEDANKQTTDSYQFGS
RSSHTLAIDASLTKLFQCMTLAY

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