Gene
| Gene Model ID | pfu_aug1.0_7813.1_31463 |
|---|---|
| Locus | scaffold7813.1 : 43646 ... 48609 : + |
| To GenomeBrowser | scaffold7813.1:43646..48609 |
| Genes list of scaffold | scaffold7813.1 |
| Synonym | NA |
Manual annotation
| Study field | Environmental Response |
|---|---|
| Gene name | histamine H3 receptor-like |
| Description | BLASTP top hit to XP_001368303.1 [Monodelphis domestica] |
| mRNA evidence |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_7813.1_31463.t1 | 1 | 1 | 7TM_GPCR_Srsx | 35 | 134 | 6.7e-07 | 28.7 | 1.8e-10 | 9.1e-07 | 28.2 |
| pfu_aug1.0_7813.1_31463.t1 | 1 | 1 | 7tm_1 | 40 | 141 | 3.3e-26 | 91.9 | 9.0e-30 | 4.5e-26 | 91.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_7813.1_31463.t1 | gi|126302733|ref|XP_001368303.1| | PREDICTED: histamine H3 receptor isoform X1 [Monodelphis domestica] | 2.0e-22 |
Transcript
| Transcript ID | pfu_aug1.0_7813.1_31463.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_7813.1_31463.t1 atgtcgaacgcctcacaaagtgacgaggaaggagaggagtttgaggaaggctttccgctcaaagtcaccgtaccatgtgg tataattatagccgtcctcattctactagctgtgataggtaatgtgttcactattgcagcgtttgtccgagattccaagc ttcgcacagtatacaacatgtacatagcgaaccttgctatcaccgatttccttttaggatgcatcagtatgccattctac gctgtgtacacactgaagaactattcctggccattcggttatcatttctgtaaggtttacatggtgatagactttaccct ctgcttgaattctgtgctcatcatgatcgtcattagccttgacagatttctacttcttcgacacggtccacactatgaac agcggttgcagaggaaaagtcgaaaatgtgtcagccaaccagagcccttggtggctatatttgttgaccgatcggcacga aaaacacatatcttgcagaggactttgactacttgcttcctggaaggcttggtgaaattcagtgaacggtag |
|
Protein
| Protein ID | pfu_aug1.0_7813.1_31463.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_7813.1_31463.t1 MSNASQSDEEGEEFEEGFPLKVTVPCGIIIAVLILLAVIGNVFTIAAFVRDSKLRTVYNMYIANLAITDFLLGCISMPFY AVYTLKNYSWPFGYHFCKVYMVIDFTLCLNSVLIMIVISLDRFLLLRHGPHYEQRLQRKSRKCVSQPEPLVAIFVDRSAR KTHILQRTLTTCFLEGLVKFSER |
|