Gene
| Gene Model ID | pfu_aug1.0_7813.1_31464 |
|---|---|
| Locus | scaffold7813.1 : 46428 ... 63374 : - |
| To GenomeBrowser | scaffold7813.1:46428..63374 |
| Genes list of scaffold | scaffold7813.1 |
| Synonym | pfu_aug2.0_10.1_00023 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_7813.1_31464.t1 | 1 | 1 | Porphobil_deam | 35 | 206 | 0.0 | 218.3 | 0.0 | 0.0 | 217.9 |
| pfu_aug1.0_7813.1_31464.t1 | 1 | 1 | Porphobil_deamC | 215 | 254 | 7.5e-08 | 32.3 | 2.7e-11 | 2.0e-07 | 31.0 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_7813.1_31464.t1 | gi|312964492|gb|ADR30032.1| | porphobilinogen deaminase [Ovis aries] | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| egg-Dshape | 1 |
| >Adult tissues | |
| Dshape | 1 |
Transcript
| Transcript ID | pfu_aug1.0_7813.1_31464.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_7813.1_31464.t1 ttggcgatggttcagacaaatacaataatcagagcaataaaggaacaccatccaaatgtcgaatttcaaatcggatcaac tacaaacgcaacccgacaaaactcgcaagatttcgattgaataatataggagagacaagtgtatttacaagggagctgga agttgctttactggagaaggaggtggatatggtggtgcactccttcaaagatctgcctgctaaactccccgatggtctgg tggttggatgtgtttatactcgagacagcccatatgacgtcatcgccatgcattctaaataccagggaaaaacattacag gacttgccgccaaacagtgtaattggaacaagttctctcagaagaatggctcagattgcgcggaaatacccccatttaaa gtttgaaaacattagaggcaatttgaacactcgattccagaagttagatgagggtgataaatactcagcccttatacttg ctgaagcaggactcgttcgaatgggatgggagaacagaatctcagagaaactacattcagacgtgtgtatgtacgcagta tgtcagggtgctatcggagttgagtgcttggagggagactcgaacactctgcgtcttctctcgtgtatccatgatccaaa gtccgcactggaatgtatagccgaaaggtccttcttcaaacagctggatgtcggctacaaagttccagtatctgtacata cagaagtaacaaaagataagatacaactatctggtggagtattcaggtattcagctctcctgagcgaagcgctgtccgtc gtccgggcgtcatccggcataaactttttacattttcgacctctcctctgctaccgttcactgaatttcaccaagccttc caggaagcaagtagtcaaagtcctctgcaagatatgtgtttttcgtgccgatcggtcaacaaatatagccaccaagggct ctggttggctgacacattttcgacttttcctctgcaaccgctgcacagagaatttgttatatcgttatattagtatcata attcattttctttttacagcttag |
|
Protein
| Protein ID | pfu_aug1.0_7813.1_31464.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_7813.1_31464.t1 GDGSDKYNNQSNKGTPSKCRISNRINYKRNPTKLARFRLNNIGETSVFTRELEVALLEKEVDMVVHSFKDLPAKLPDGLV VGCVYTRDSPYDVIAMHSKYQGKTLQDLPPNSVIGTSSLRRMAQIARKYPHLKFENIRGNLNTRFQKLDEGDKYSALILA EAGLVRMGWENRISEKLHSDVCMYAVCQGAIGVECLEGDSNTLRLLSCIHDPKSALECIAERSFFKQLDVGYKVPVSVHT EVTKDKIQLSGGVFRYSALLSEALSVVRASSGINFLHFRPLLCYRSLNFTKPSRKQVVKVLCKICVFRADRSTNIATKGS GWLTHFRLFLCNRCTENLLYRYISIIIHFLFTA |
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