Gene
| Gene Model ID | pfu_aug1.0_782.1_58242 |
|---|---|
| Locus | scaffold782.1 : 12876 ... 21241 : + |
| To GenomeBrowser | scaffold782.1:12876..21241 |
| Genes list of scaffold | scaffold782.1 |
| Synonym | pfu_aug2.0_51.1_03507 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_782.1_58242.t1 | 2 | 1 | Golgin_A5 | 12 | 120 | 0.0 | 179.0 | 0.0011 | 4.3 | 5.7 |
| pfu_aug1.0_782.1_58242.t1 | 2 | 2 | Golgin_A5 | 159 | 541 | 0.0 | 179.0 | 0.0 | 0.0 | 177.0 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_782.1_58242.t1 | gi|260836353|ref|XP_002613170.1| | hypothetical protein BRAFLDRAFT_154839 [Branchiostoma floridae] | 0.0 |
Transcript
| Transcript ID | pfu_aug1.0_782.1_58242.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_782.1_58242.t1 atgtcatggttaagtaatatcacagggaaagctgaggagttcctcaacaaaattgaccagtcagccgctcaggcactaca taaagaggaggaagaacagagattgaacctctctctgcccctcactagggaagtcacctcattggggtcaccaccttctt catcaagggaccacaatgtagatagagcggcatatagtgtgccatctaagacaacttttaagaaagacaattctgcatca tcttttgtttctaccccgataaaagcgaacaaagcagcacctttagtgggatcaagtggtgtggctaaacagactggtaa ggtaactgtaaaacctccagctgactctgtgaccaaacaggcatcaagtactgggccgcagggagctggcacacaagaac agaaaacatcctctgctagtgcacctgctaagaagaaattagacactgatgaagctctttttgatttcctgaacagcagt gagccattggaggctaacaaaaagaaagcagcccctcctccctctgtggttgacccccctcgtcattctcgtcagtctag cacgtcatctgtggtgtctaacaagggggacagtgacagaggtagtccttccgagcctgatggttctgcggacgttctag ctctggctgatgctatgatggaacagagtccaagtaatagtgttagcagtaaccaagatggcgatcattctgntctggag aaccagagggaaaggatactgaaggaccatacagattccagtggtgtacatagccaggctctcgactcattaaaacagaa acttgtagaggtggagggggccctcaggagggaacaggaggctctcaagaaaatacagcaagaatcttctgacagacaga gtcgattggaacaagaacagaaaagtttggcagagtctctaactgcagcagagaggcgtgtcaatgaagaaagggcaaag gcatcagacttgtccaatcagctgaagacagcaaagacccaatcagagaacgcgaaacaagaactcacagactacaagga gaaagctaccaggatactacaatctaaggagagattgattgcaagtttacgtgagggatcaggagcttctggagaggcag tgggtgtgtcgagccttgagtatgactcggtcaaacaggagagggatatgtttaaggaggaactacagcagactaaaatg accatggaaaacctcaggatggaattgtcggatttagaagcccagttacaacaggacagtgacacagctaatgatcagat cagctcgttagaggaatcgttacgacacgagaggaggaaatgtgaggacgcagaacaagaactcctcagacaaaaacagg aattacaatacagcttagaagagacaaggaaacagaaaactacattccagacatgtatcagtgacagagaggcagagata gaaagactacgaaatcagattatgaccaagtcgatgagttcatctacagaaactgagttagaatctcgagtgaaaactct gaccgagtcactgatacagaaacagaccatgttagagaccctgggtacagagaaaaactccttagctctacaactagaaa ggacacaggtcatgatcaaatgtgaaggtgaaggtcaatacccgaaagcaggtccacttgcttag |
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Protein
| Protein ID | pfu_aug1.0_782.1_58242.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_782.1_58242.t1 MSWLSNITGKAEEFLNKIDQSAAQALHKEEEEQRLNLSLPLTREVTSLGSPPSSSRDHNVDRAAYSVPSKTTFKKDNSAS SFVSTPIKANKAAPLVGSSGVAKQTGKVTVKPPADSVTKQASSTGPQGAGTQEQKTSSASAPAKKKLDTDEALFDFLNSS EPLEANKKKAAPPPSVVDPPRHSRQSSTSSVVSNKGDSDRGSPSEPDGSADVLALADAMMEQSPSNSVSSNQDGDHSXLE NQRERILKDHTDSSGVHSQALDSLKQKLVEVEGALRREQEALKKIQQESSDRQSRLEQEQKSLAESLTAAERRVNEERAK ASDLSNQLKTAKTQSENAKQELTDYKEKATRILQSKERLIASLREGSGASGEAVGVSSLEYDSVKQERDMFKEELQQTKM TMENLRMELSDLEAQLQQDSDTANDQISSLEESLRHERRKCEDAEQELLRQKQELQYSLEETRKQKTTFQTCISDREAEI ERLRNQIMTKSMSSSTETELESRVKTLTESLIQKQTMLETLGTEKNSLALQLERTQVMIKCEGEGQYPKAGPLA |
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