Gene
| Gene Model ID | pfu_aug1.0_7830.1_09649 |
|---|---|
| Locus | scaffold7830.1 : 41167 ... 51985 : - |
| To GenomeBrowser | scaffold7830.1:41167..51985 |
| Genes list of scaffold | scaffold7830.1 |
| Synonym | NA |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_7830.1_09649.t1 | 2 | 1 | ASC | 5 | 118 | 1.1e-28 | 100.1 | 1.3e-26 | 1.9e-22 | 79.5 |
| pfu_aug1.0_7830.1_09649.t1 | 2 | 2 | ASC | 127 | 180 | 1.1e-28 | 100.1 | 2.2e-08 | 0.00033 | 19.4 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_7830.1_09649.t1 | gi|300795694|ref|NP_001178180.1| | amiloride-sensitive cation channel 3 [Bos taurus] | 3.0e-13 |
Transcript
| Transcript ID | pfu_aug1.0_7830.1_09649.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_7830.1_09649.t1 atgcgacgtgcccaaaattccccggtcactgtcaacatcgtctccaaattaaacagttctatcgtgttcccagcggtcac tatctgtaaccagaacgctttcagaaggacattggctctgcagaacaaacatttcagattgatatccgtcttgtttgagg accaacgatacaggcgcatcaggctatcaatgaaggatttcagcatgccactccgggaactttatacaatgaatgcacat cagaaagaggacttgattctaagatgtaaatggaaaggtataccgtgtagtgcagagaattttaccacagtactaactag gtatggtcaatgttacacgttcaacggtatgggagacgacctgaaaacgatagaatctccaggttcaattccatcatgca gtactaaagattggacctgtatgaagaaagcaaaaggtactacgacgaaaaatttccttcatctgaacatcctgtttcat gacatgagttacgacgtgctgacccaacaggaggcttacgacatatttggacttctaggaggttactacggtcgnatcat caaacgccttttataccgtggatatgatcctaatgtcaccacacggacactaggcttggtacttgaccaatctacagtct tgtacaagcgcatccttgagacttgcactctgactgactgtgacgacgggactccatga |
|
Protein
| Protein ID | pfu_aug1.0_7830.1_09649.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_7830.1_09649.t1 MRRAQNSPVTVNIVSKLNSSIVFPAVTICNQNAFRRTLALQNKHFRLISVLFEDQRYRRIRLSMKDFSMPLRELYTMNAH QKEDLILRCKWKGIPCSAENFTTVLTRYGQCYTFNGMGDDLKTIESPGSIPSCSTKDWTCMKKAKGTTTKNFLHLNILFH DMSYDVLTQQEAYDIFGLLGGYYGXIIKRLLYRGYDPNVTTRTLGLVLDQSTVLYKRILETCTLTDCDDGTP |
|