Gene
| Gene Model ID | pfu_aug1.0_784.1_29427 |
|---|---|
| Locus | scaffold784.1 : 1563 ... 19955 : - |
| To GenomeBrowser | scaffold784.1:1563..19955 |
| Genes list of scaffold | scaffold784.1 |
| Synonym | pfu_aug2.0_1224.1_14884 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_784.1_29427.t1 | 3 | 1 | TPR_12 | 400 | 464 | 1.4e-30 | 105.0 | 2.7e-14 | 3.1e-11 | 43.0 |
| pfu_aug1.0_784.1_29427.t1 | 3 | 1 | TPR_11 | 406 | 463 | 3.8e-07 | 29.6 | 4.8e-07 | 0.00055 | 19.5 |
| pfu_aug1.0_784.1_29427.t1 | 4 | 1 | TPR_10 | 408 | 431 | 1.0e-12 | 47.4 | 0.00059 | 0.67 | 9.9 |
| pfu_aug1.0_784.1_29427.t1 | 4 | 1 | TPR_1 | 410 | 422 | 1.6e-07 | 30.6 | 0.33 | 370.0 | 0.9 |
| pfu_aug1.0_784.1_29427.t1 | 3 | 2 | TPR_12 | 430 | 508 | 1.4e-30 | 105.0 | 5.9e-18 | 6.7e-15 | 54.7 |
| pfu_aug1.0_784.1_29427.t1 | 4 | 2 | TPR_10 | 433 | 472 | 1.0e-12 | 47.4 | 0.00033 | 0.37 | 10.7 |
| pfu_aug1.0_784.1_29427.t1 | 4 | 2 | TPR_1 | 434 | 463 | 1.6e-07 | 30.6 | 7.2e-06 | 0.0082 | 15.7 |
| pfu_aug1.0_784.1_29427.t1 | 3 | 1 | TPR_7 | 436 | 467 | 6.9e-07 | 28.6 | 1.1e-05 | 0.013 | 15.2 |
| pfu_aug1.0_784.1_29427.t1 | 3 | 2 | TPR_11 | 476 | 507 | 3.8e-07 | 29.6 | 0.05 | 57.0 | 3.4 |
| pfu_aug1.0_784.1_29427.t1 | 4 | 3 | TPR_10 | 479 | 509 | 1.0e-12 | 47.4 | 5.0e-06 | 0.0057 | 16.5 |
| pfu_aug1.0_784.1_29427.t1 | 3 | 2 | TPR_7 | 479 | 503 | 6.9e-07 | 28.6 | 0.0061 | 7.0 | 6.7 |
| pfu_aug1.0_784.1_29427.t1 | 4 | 3 | TPR_1 | 482 | 496 | 1.6e-07 | 30.6 | 0.026 | 30.0 | 4.4 |
| pfu_aug1.0_784.1_29427.t1 | 3 | 3 | TPR_12 | 524 | 560 | 1.4e-30 | 105.0 | 9.1e-08 | 0.0001 | 22.1 |
| pfu_aug1.0_784.1_29427.t1 | 4 | 4 | TPR_10 | 542 | 560 | 1.0e-12 | 47.4 | 0.013 | 14.0 | 5.7 |
| pfu_aug1.0_784.1_29427.t1 | 3 | 3 | TPR_11 | 542 | 559 | 3.8e-07 | 29.6 | 0.11 | 120.0 | 2.3 |
| pfu_aug1.0_784.1_29427.t1 | 4 | 4 | TPR_1 | 543 | 560 | 1.6e-07 | 30.6 | 0.0095 | 11.0 | 5.8 |
| pfu_aug1.0_784.1_29427.t1 | 3 | 3 | TPR_7 | 545 | 560 | 6.9e-07 | 28.6 | 0.38 | 430.0 | 1.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_784.1_29427.t1 | gi|317412023|sp|A0JM23.2|NPHP3_XENTR | Nephrocystin-3 | 0.0 |
Transcript
| Transcript ID | pfu_aug1.0_784.1_29427.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_784.1_29427.t1 atgggaactacagggtcatttttacgcaaccaagaggatgatgatattttgggaaacgaccttgacggaagcagtcatgg ggtcattaagcggattcccgtggaaattaaacctcgcggaaagctgggcatcctcagtcagggctcgcgcaaagacaaaa agatcggaggaagtcttcggtcggccttgtcggtcgacctggaaaacccggaggtggaaaagatcagaaaggaatttgaa atgtacagactgaacaaagagaatgacataaccgacatgaagaagaaagaaacaaggcttcagatggagaataaacgact gcgagcggaattactcgtactacagaaaacctgtacaaatctacgagcggagcgcgacaaagccattgaagcggaacatc aatcccaggccagagctgctgccttccagagtgatcgagataaagtacagagaaatttcaagattttcagagaaaacatg gagctccaattacaaacaatgttaagagataaacggaatttggagggtaaacttcacaagatagcccatgggtatactct ggaggagaccgatatctcatcacgccctgattttgactcttcattaggaagccctaaccctggggactggtggacagccc tggagagtgagccgtctatcagtaatgtgagtcaagtccagcagtccactttcagaggaccagagttagcacacagtatg atggaaccagatggaccattcaataatatcaacagagaggactggagtacagtattagcaaacatgacacaagttcttcc ccctgtaccggaacattccctcagcagtgttttacgtatatatatctcgtcacctcgagacactcatgtggaggtggaca tactcaataaggagtattttccaagactttcatccttatgccagtctgcaggtcgtactttattacttattcacctaatg gtcgatgataatactacgctcacccctcagcaagcggaggtccatttaaaatggctgcttgatccgttacctgttgatgt tcgtatgattgtatcatgtaatgataaaacctgtccacaggcatggagatatatacgtcatgaagggaagattggttcat acctagacgttttactcacctgtactgactgtgatagtttgtacgctaaagtacttgatttgtcaagggtagcgttagaa actcatgaatccaggggctttctcaaaagtgcagttccttcactacagagagcactagagatccgagagatttccctgga ccctgatcaccctgttgtagccaggtcacatcaccagcttgcagggctccatgcacagtggggtaaattctccacggccg aagaattctataaacaagccctggacatctatatagataaatacggatcagatcattatcttgtggcaaaggaactggat gctcttgcagtactgtatcaaaaacaagataagcatgagctggcagaaccattgaagaagagagccatgtcgatcaggaa gaaagtcaaaacaccaagagtgacttctggtcagatcaagtcagtagtccaaagaagagctctccaattagaggagttag caataggaccagattcaccagacctggcacgctcccttaatgagctgggtgtactgcattatctacaaaatgacttcgag taa |
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Protein
| Protein ID | pfu_aug1.0_784.1_29427.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_784.1_29427.t1 MGTTGSFLRNQEDDDILGNDLDGSSHGVIKRIPVEIKPRGKLGILSQGSRKDKKIGGSLRSALSVDLENPEVEKIRKEFE MYRLNKENDITDMKKKETRLQMENKRLRAELLVLQKTCTNLRAERDKAIEAEHQSQARAAAFQSDRDKVQRNFKIFRENM ELQLQTMLRDKRNLEGKLHKIAHGYTLEETDISSRPDFDSSLGSPNPGDWWTALESEPSISNVSQVQQSTFRGPELAHSM MEPDGPFNNINREDWSTVLANMTQVLPPVPEHSLSSVLRIYISSPRDTHVEVDILNKEYFPRLSSLCQSAGRTLLLIHLM VDDNTTLTPQQAEVHLKWLLDPLPVDVRMIVSCNDKTCPQAWRYIRHEGKIGSYLDVLLTCTDCDSLYAKVLDLSRVALE THESRGFLKSAVPSLQRALEIREISLDPDHPVVARSHHQLAGLHAQWGKFSTAEEFYKQALDIYIDKYGSDHYLVAKELD ALAVLYQKQDKHELAEPLKKRAMSIRKKVKTPRVTSGQIKSVVQRRALQLEELAIGPDSPDLARSLNELGVLHYLQNDFE |
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