Genome browser

OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_7842.1_53043
Locus scaffold7842.1 : 3924 ... 19935 : -
To GenomeBrowser scaffold7842.1:3924..19935
Genes list of scaffold scaffold7842.1
Synonym pfu_aug2.0_378.1_27324

Manual annotation
Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug1.0_7842.1_53043.t1 1 1 Lectin_C 33 138 5.7e-10 39.7 5.6e-14 8.3e-10 39.2

Transcript
Transcript IDpfu_aug1.0_7842.1_53043.t1
Definition-
>pfu_aug1.0_7842.1_53043.t1
atgttctttgacagagcatatacttgtcccaatgggtatacactatacaatgctggatccaaggcatactgctggctgat
gaccgatgaatgggcgtcaagggatattagccaatctaaatgtgcagataaaaatggaacctttgtgatatttattgaca
aagaaaagcatgatgccgccgtaaaaatcgccatggatctctattcgtccaaatccacaggtttttggatagatgcaatg
ctaaatactactaataaaaaatggtactggtcggatggaacacaagttgacgaggacaggtttcgccaaaatggagaatt
tattgaccgcctggcaaccaaaccgtgtgtgactttcttcaagagtaaatatactgtaaatgactgcaacactgcgaaat
tcgcactctgtgaagtgccattagagaggggataa

Protein
Protein IDpfu_aug1.0_7842.1_53043.t1
Definition-
>pfu_aug1.0_7842.1_53043.t1
MFFDRAYTCPNGYTLYNAGSKAYCWLMTDEWASRDISQSKCADKNGTFVIFIDKEKHDAAVKIAMDLYSSKSTGFWIDAM
LNTTNKKWYWSDGTQVDEDRFRQNGEFIDRLATKPCVTFFKSKYTVNDCNTAKFALCEVPLERG

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