Gene
| Gene Model ID | pfu_aug1.0_785.1_65621 |
|---|---|
| Locus | scaffold785.1 : 8626 ... 12250 : + |
| To GenomeBrowser | scaffold785.1:8626..12250 |
| Genes list of scaffold | scaffold785.1 |
| Synonym | pfu_aug2.0_458.1_27424 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_785.1_65621.t1 | 1 | 1 | Spot_14 | 17 | 161 | 3.0e-25 | 88.9 | 3.6e-29 | 5.3e-25 | 88.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_785.1_65621.t1 | gi|241096187|ref|XP_002409548.1| | Mid1-interacting protein, putative [Ixodes scapularis] | 5.0e-17 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| egg-Dshape | 1 |
| trochophore | 1 |
| >Adult tissues | |
| Dshape | 1 |
| mantle | 1 |
| mantlePallium | 1 |
Transcript
| Transcript ID | pfu_aug1.0_785.1_65621.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_785.1_65621.t1 atgatgtcttccagttcgccagatttaagacattcttcaagcaatggttcttcacaggaatcgcttcttactgctttgaa caaatttgtgcaagctgttgattctatggacgacagggtaatggtaccgagccggttaaaagacatgagtgtgacagact cggacacagacagaccgatggtcagtgagaaaaacaataatatggcactagtgccgtcaattacaccgggtacggactta tttggattctatagtctactcaatactattaaaacagaactgatcaccggcacaaaatcggaagaagatcatacccagga gactgaggctcctgaaggggtaattgatgataatgatgcatcaaagaaaaccgcccaagtgtttaaacaccacctaagtg gactttttagtgttcttcatcaaatgacggaaacagctaaatatctgacagtaaaatatgaatccgagattggtgaaaac tcaagtaaatcgctgtcttccttgacaatttag |
|
Protein
| Protein ID | pfu_aug1.0_785.1_65621.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_785.1_65621.t1 MMSSSSPDLRHSSSNGSSQESLLTALNKFVQAVDSMDDRVMVPSRLKDMSVTDSDTDRPMVSEKNNNMALVPSITPGTDL FGFYSLLNTIKTELITGTKSEEDHTQETEAPEGVIDDNDASKKTAQVFKHHLSGLFSVLHQMTETAKYLTVKYESEIGEN SSKSLSSLTI |
|