Gene
| Gene Model ID | pfu_aug1.0_786.1_65626 |
|---|---|
| Locus | scaffold786.1 : 11806 ... 23239 : + |
| To GenomeBrowser | scaffold786.1:11806..23239 |
| Genes list of scaffold | scaffold786.1 |
| Synonym | pfu_aug2.0_51.1_03499 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_786.1_65626.t1 | 2 | 1 | Fibrinogen_C | 48 | 83 | 0.0 | 217.2 | 1.6e-10 | 1.2e-06 | 28.3 |
| pfu_aug1.0_786.1_65626.t1 | 2 | 2 | Fibrinogen_C | 134 | 301 | 0.0 | 217.2 | 0.0 | 0.0 | 191.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_786.1_65626.t1 | gi|260818270|ref|XP_002604306.1| | hypothetical protein BRAFLDRAFT_88596 [Branchiostoma floridae] | 0.0 |
Transcript
| Transcript ID | pfu_aug1.0_786.1_65626.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_786.1_65626.t1 atgtacacgagtgacgagagggattctaatgagataaagaagatcctgacgacaatctcaacagcactcgcaatagagca ccgaattgagcatcgacgaatccctgacaagctagacgtcggaccagatagtggttgtatggccatgaaaaatcaaaaga gtggtgtttacaaagtacgaatcgccgatagatcgacaaaacaagtctactgcgatatgaccacggatggtgggggatgg acggtaactgttctgatgtcacgattgttgttcctttcctttttactaacaggtaactgttctgatgtcatgtttggtgt tcctttcccttttaccatcagggtattttgctgtgactgctgggtcttgttggagatcccctcccccctgtcaatgaagg tttttcaaagaagagtggatggaacacagaacttcactcagaattacgacgcctatcgtagaggatttgggaatataaag aaagaattttggctagggaatgagataatacacaaactaacaaaggatggttcatgtgaacttcgtgtagatctggagga tttcgacaataaaacgagatatgccttgtataaaggtttcaaagttggtgatgagagtagtggcttcaaactaacattag gatcatacagtggaaatgcaggtgattcaatgactcgtgtcaatggaatgaaattttctacatacgatagggatcaagat acttggagtggtggtcattgtgcggctagatacaaaggtggattttggtacgaatcctgtcattatgctaatccaaatgg acattattttaaaggaaaacacaaatcatacgctgacgggatcaattggtaccattggcgaggacattattactcaatga aacatacaaaaattatgtttcgctgcaagtaa |
|
Protein
| Protein ID | pfu_aug1.0_786.1_65626.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_786.1_65626.t1 MYTSDERDSNEIKKILTTISTALAIEHRIEHRRIPDKLDVGPDSGCMAMKNQKSGVYKVRIADRSTKQVYCDMTTDGGGW TVTVLMSRLLFLSFLLTGNCSDVMFGVPFPFTIRVFCCDCWVLLEIPSPLSMKVFQRRVDGTQNFTQNYDAYRRGFGNIK KEFWLGNEIIHKLTKDGSCELRVDLEDFDNKTRYALYKGFKVGDESSGFKLTLGSYSGNAGDSMTRVNGMKFSTYDRDQD TWSGGHCAARYKGGFWYESCHYANPNGHYFKGKHKSYADGINWYHWRGHYYSMKHTKIMFRCK |
|