Gene
| Gene Model ID | pfu_aug1.0_7879.1_09660 |
|---|---|
| Locus | scaffold7879.1 : 16197 ... 19355 : - |
| To GenomeBrowser | scaffold7879.1:16197..19355 |
| Genes list of scaffold | scaffold7879.1 |
| Synonym | pfu_aug2.0_1008.1_27981 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_7879.1_09660.t1 | 1 | 1 | Acyl-ACP_TE | 120 | 204 | 2.2e-06 | 26.8 | 5.2e-10 | 3.9e-06 | 26.0 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_7879.1_09660.t1 | gi|260823226|ref|XP_002604084.1| | hypothetical protein BRAFLDRAFT_71626 [Branchiostoma floridae] | 8.0e-13 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
Transcript
| Transcript ID | pfu_aug1.0_7879.1_09660.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_7879.1_09660.t1 atgttcatgcacgaaaatgaaaataatatcaacaaaaaatgcactggcttagatcacacagtacaattgaccagcctcct tcagcttatggaatcagcatccatgtttgcatattggaatgtggataacaaataccaaaacttctcattttgggacatca taaggaacgcctttcacaaaaatctgtttttcgtggccgctctaaaatgtgaaatatacgaagaattctaccacatatca gctagaaaatataaccttgatgttctcatagagctctcaaacataggccgatcgtcgtttacacttaccttcacattgaa agcaccatcacagccctcgccgcaagccaagcttgattttacttcaatctgtatagacttgaatacaagaaaagcttgcc ctttgcctcaagaaactcgtgatatattcaaacaacatcacattgaaaagactcaagtacatcaaagaatggagagactc accaaacccaatgattgcatacccttcgccgtttcaatttattacacggacacagatgaaaatcagcacaccaactggat tacatacatccgagcatgttataatgcgtgcatgacgggactgataaacaaaagatacgattcactcagcgagaagtacg ctagacgcggagtaaaaacctttgaaatgacattcatgaaagaatctaagctagcggatactcttgacgttttttcttgg aaactttctgatcaggaggaaacttgcattgcttttgacattcgaaagggtacaagtctttgctgtcaaggtaaaatgtc attccatgctgcagaatcggacgctaccaacaagcaaagcaagctttaa |
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Protein
| Protein ID | pfu_aug1.0_7879.1_09660.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_7879.1_09660.t1 MFMHENENNINKKCTGLDHTVQLTSLLQLMESASMFAYWNVDNKYQNFSFWDIIRNAFHKNLFFVAALKCEIYEEFYHIS ARKYNLDVLIELSNIGRSSFTLTFTLKAPSQPSPQAKLDFTSICIDLNTRKACPLPQETRDIFKQHHIEKTQVHQRMERL TKPNDCIPFAVSIYYTDTDENQHTNWITYIRACYNACMTGLINKRYDSLSEKYARRGVKTFEMTFMKESKLADTLDVFSW KLSDQEETCIAFDIRKGTSLCCQGKMSFHAAESDATNKQSKL |
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