Gene
| Gene Model ID | pfu_aug1.0_791.1_43827 |
|---|---|
| Locus | scaffold791.1 : 40 ... 9455 : + |
| To GenomeBrowser | scaffold791.1:40..9455 |
| Genes list of scaffold | scaffold791.1 |
| Synonym | pfu_aug2.0_3819.1_32557 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_791.1_43827.t1 | 1 | 1 | HTH_3 | 22 | 55 | 5.2e-06 | 26.1 | 5.6e-10 | 8.3e-06 | 25.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_791.1_43827.t1 | gi|45199044|ref|NP_986073.1| | AFR526Cp [Ashbya gossypii ATCC 10895] | 6.0e-14 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| egg-4cell | 1 |
| 8-16cell | 1 |
| egg-Dshape | 1 |
| trochophore | 1 |
| >Adult tissues | |
| Dshape | 1 |
| adductorMuscle | 1 |
| maleGonad | 1 |
| mantle | 1 |
Transcript
| Transcript ID | pfu_aug1.0_791.1_43827.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_791.1_43827.t1 atgattgaaaagatgcttgctacacgtacaccttcttacatagctatacttcgtcgttctccgaaaattaatgagaagca acaggtgattaacgattatgaggcaggaaaggccataccaaatcaacaggttcttgctaaaatggaaagagttctcgcaa tgaaactgcgaggtaaagacaaagggaaacctctcggaggcccggcgaaaaagtga |
|
Protein
| Protein ID | pfu_aug1.0_791.1_43827.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_791.1_43827.t1 MIEKMLATRTPSYIAILRRSPKINEKQQVINDYEAGKAIPNQQVLAKMERVLAMKLRGKDKGKPLGGPAKK |
|