Gene
| Gene Model ID | pfu_aug1.0_7911.1_53054 |
|---|---|
| Locus | scaffold7911.1 : 10285 ... 18975 : - |
| To GenomeBrowser | scaffold7911.1:10285..18975 |
| Genes list of scaffold | scaffold7911.1 |
| Synonym | pfu_aug2.0_55.1_16821 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_7911.1_53054.t1 | 1 | 1 | RNase_P_Rpp14 | 3 | 82 | 5.5e-16 | 58.4 | 4.1e-20 | 6.0e-16 | 58.2 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_7911.1_53054.t1 | gi|334343581|ref|XP_001368716.2| | 2.0e-20 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| egg-4cell | 1 |
| egg-Dshape | 1 |
| >Adult tissues | |
Transcript
| Transcript ID | pfu_aug1.0_7911.1_53054.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_7911.1_53054.t1 atgagtgcagcattgttcaagacaattatcaactctgcagttaaagatatgtttggtgagattggtttgagcaatacagt tgatatattgaagtatacagaaaagagcaaagaagcccttttacgagttgcgtatcagttctatgtacagctttggagtt cccttacattgatcagtaactatagcaacaagagatgtgctttcagagtattacaggtttccccacatttgacggctctg tcaaataacagcagagaaatgtgtatacctacacttgagtctgaaaagacttga |
|
Protein
| Protein ID | pfu_aug1.0_7911.1_53054.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_7911.1_53054.t1 MSAALFKTIINSAVKDMFGEIGLSNTVDILKYTEKSKEALLRVAYQFYVQLWSSLTLISNYSNKRCAFRVLQVSPHLTAL SNNSREMCIPTLESEKT |
|