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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_7913.1_24303
Locus scaffold7913.1 : 1 ... 19553 : -
To GenomeBrowser scaffold7913.1:1..19553
Genes list of scaffold scaffold7913.1
Synonym pfu_aug2.0_495.1_17488

Manual annotation
Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug1.0_7913.1_24303.t1 2 1 Reeler 5 47 8.5e-10 38.9 5.7e-14 8.5e-10 38.9
pfu_aug1.0_7913.1_24303.t1 2 2 Reeler 168 168 8.5e-10 38.9 1.0 15000.0 -4.5

Transcript
Transcript IDpfu_aug1.0_7913.1_24303.t1
Definition-
>pfu_aug1.0_7913.1_24303.t1
ggtactcgtggacaggctctgacccatgttgatggcacaaataaaaatgtcatggagtttgtatggcaggctccaagagt
tcctcaaggccatgtcatttttcgggcaacaattgtcaaggagtatacaacattctgggttggagttaactcccctatag
tgtatgacctctacagtcgaacacaactctctcgacaacaagctcttagccttaccaactttttggcaccggaatgcaac
atagctccaaaaccatctacgcctgtccccaaaacaactaccatcagaaccactaccaccttgaaacctactacaaccac
accggtgccaaccacaccagtgccaaccacaccggtgccaactaccacaaccactgttccaagtaccacaactactccag
tgtcaacaacaaccactcaaccatccacaaccactaccacttccactactactgttcctactaccactccaaccaccaca
ttgcctaccaccacaactaccactgaaaggtcaacaactaccaagcagccatcaactacctcaaccacatttgcgccgac
cacaaccactcagcaaccaacaactaccagtgaagttactacaaagtctccagttccacagggcagcgacagtgtgacag
agtgtatcacaaacaaaggaaaggtcaacgtatttcagtcctataacctggacactcatgctaactccagactccgaaat

Protein
Protein IDpfu_aug1.0_7913.1_24303.t1
Definition-
>pfu_aug1.0_7913.1_24303.t1
GTRGQALTHVDGTNKNVMEFVWQAPRVPQGHVIFRATIVKEYTTFWVGVNSPIVYDLYSRTQLSRQQALSLTNFLAPECN
IAPKPSTPVPKTTTIRTTTTLKPTTTTPVPTTPVPTTPVPTTTTTVPSTTTTPVSTTTTQPSTTTTTSTTTVPTTTPTTT
LPTTTTTTERSTTTKQPSTTSTTFAPTTTTQQPTTTSEVTTKSPVPQGSDSVTECITNKGKVNVFQSYNLDTHANSRLRN

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