Gene
| Gene Model ID | pfu_aug1.0_7916.1_67764 |
|---|---|
| Locus | scaffold7916.1 : 1 ... 12025 : - |
| To GenomeBrowser | scaffold7916.1:1..12025 |
| Genes list of scaffold | scaffold7916.1 |
| Synonym | pfu_aug2.0_672.1_07790 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_7916.1_67764.t1 | 4 | 1 | WD40 | 14 | 47 | 1.8e-28 | 97.3 | 5.6e-12 | 4.2e-08 | 32.7 |
| pfu_aug1.0_7916.1_67764.t1 | 4 | 2 | WD40 | 52 | 89 | 1.8e-28 | 97.3 | 4.3e-12 | 3.2e-08 | 33.1 |
| pfu_aug1.0_7916.1_67764.t1 | 4 | 3 | WD40 | 96 | 131 | 1.8e-28 | 97.3 | 1.9e-09 | 1.4e-05 | 24.7 |
| pfu_aug1.0_7916.1_67764.t1 | 4 | 4 | WD40 | 137 | 164 | 1.8e-28 | 97.3 | 0.00011 | 0.82 | 9.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_7916.1_67764.t1 | gi|291240771|ref|XP_002740272.1| | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
| Dshape | 1 |
| maleGonad | 1 |
| pearlSac | 1 |
Transcript
| Transcript ID | pfu_aug1.0_7916.1_67764.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_7916.1_67764.t1 atgcagacaatacatggaggattgaaaggaacagaaaaatctcatagtggtcacacatcacatgtcctgtgcatggcatt atcctcagatggaaagtatctggcgtctggtgataggaacaaactgatcttcatatggaatccagacacattagagttga tacacaaattcacaggccatagagatgctgtttctggtctttccttcagaaagggcacccaccaattgtttagtgcatca cttgatcgttctgtaaaaatttggagtgtggatgagcgggcttatgtggaaacactatttggtcatcaggacagtataac atctgtagacagtctgacgagagatcgtgctgtgacatcgggagggagggacggcagtatccgagtatggaaggttgttg aggagtcacagcttgtattccatggacattgtggttccatagactgtgtagccctgatcaacgaatccaactttatctct ggtgctgataacaaacgattggcattcaataaagaccaaggtctccgatttctaattatgggacgtcatcagacctatag aataacagaatattatgactatagaaaattgtcaaataagcaggtcataactatcatcttgtacagaacgcagtctaatt ga |
|
Protein
| Protein ID | pfu_aug1.0_7916.1_67764.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_7916.1_67764.t1 MQTIHGGLKGTEKSHSGHTSHVLCMALSSDGKYLASGDRNKLIFIWNPDTLELIHKFTGHRDAVSGLSFRKGTHQLFSAS LDRSVKIWSVDERAYVETLFGHQDSITSVDSLTRDRAVTSGGRDGSIRVWKVVEESQLVFHGHCGSIDCVALINESNFIS GADNKRLAFNKDQGLRFLIMGRHQTYRITEYYDYRKLSNKQVITIILYRTQSN |
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