Gene
| Gene Model ID | pfu_aug1.0_7925.1_60333 |
|---|---|
| Locus | scaffold7925.1 : 30506 ... 47333 : + |
| To GenomeBrowser | scaffold7925.1:30506..47333 |
| Genes list of scaffold | scaffold7925.1 |
| Synonym | pfu_aug2.0_1.1_03351 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_7925.1_60333.t1 | 1 | 1 | Flavodoxin_1 | 4 | 52 | 7.4e-11 | 42.2 | 2.8e-14 | 1.4e-10 | 41.3 |
| pfu_aug1.0_7925.1_60333.t1 | 2 | 1 | FAD_binding_1 | 85 | 124 | 5.0e-14 | 52.2 | 2.1e-08 | 0.00011 | 21.7 |
| pfu_aug1.0_7925.1_60333.t1 | 2 | 2 | FAD_binding_1 | 168 | 267 | 5.0e-14 | 52.2 | 1.9e-10 | 9.4e-07 | 28.4 |
| pfu_aug1.0_7925.1_60333.t1 | 1 | 1 | NAD_binding_1 | 227 | 306 | 6.4e-07 | 29.9 | 2.6e-10 | 1.3e-06 | 28.9 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_7925.1_60333.t1 | gi|33331169|gb|AAQ10794.1| | NADPH-dependent FMN and FAD containing oxidoreductase-like protein [Branchiostoma floridae] | 2.0e-39 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
Transcript
| Transcript ID | pfu_aug1.0_7925.1_60333.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_7925.1_60333.t1 atgacaaagtccttatgctccatgcgttatgctgtccttggacttggtgactcatcctacgtcaaatttaatttcattgc caagaaaatagacaaacgtcttcagcaattaggtgccaagcagctagaatcagttgggttagctgatgatcaacatgata taggcttacctccgaggtatagagtgtcattgatagataaggactgcccacgctttgtcaatggtgtcacagtcacggaa agtaaaacagccgataataataatccctaccaagcaaggttgctgtccaataggagagtgaccgctactgaccatttcca ggatgtcagattggtcaaacttgatatatcagactcaggaatgaggtacatgtatgttcatctatcctatagtgacacgt ttgcttatatgcccctcattttatatgcacgatacttacatgatacctacagaaatggagattcaatatgcattgagatt aaggtcaccttcaagtcaaggtcacttggttacggtcaaatcggcttacatgatatgcattatacatgcagttattctcc tggagacgtggtaatgatacatcctgagaactccccggaaacagtcagtgattttatacagtatatgggtctccactcag actctatgtttacacttcaacaaaatgatccaggtaacgctttgttctttggctgtcggagtgagagcaaagactttatg tgtgaagaagactggaagtcattggtcagtactggtgcactcaatcttttcacagctttctcgagagaccaggaggacaa ggtttatgttcagcataaaatcaaagaaaatggggcatatgtatgggatatgataaacaactatcaagcttggttctacg tggcaggcaatgctaaacagatgccagatgatgtacgtgatgctgtcaagtctgtgatagaagaacatggtcacatgaca tctgatgaagcagaaatatatctcaggaagctggaccagtgtcggagatatcaagccgagacctggtcatga |
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Protein
| Protein ID | pfu_aug1.0_7925.1_60333.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_7925.1_60333.t1 MTKSLCSMRYAVLGLGDSSYVKFNFIAKKIDKRLQQLGAKQLESVGLADDQHDIGLPPRYRVSLIDKDCPRFVNGVTVTE SKTADNNNPYQARLLSNRRVTATDHFQDVRLVKLDISDSGMRYMYVHLSYSDTFAYMPLILYARYLHDTYRNGDSICIEI KVTFKSRSLGYGQIGLHDMHYTCSYSPGDVVMIHPENSPETVSDFIQYMGLHSDSMFTLQQNDPGNALFFGCRSESKDFM CEEDWKSLVSTGALNLFTAFSRDQEDKVYVQHKIKENGAYVWDMINNYQAWFYVAGNAKQMPDDVRDAVKSVIEEHGHMT SDEAEIYLRKLDQCRRYQAETWS |
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