Gene
| Gene Model ID | pfu_aug1.0_793.1_00493 |
|---|---|
| Locus | scaffold793.1 : 6415 ... 18195 : - |
| To GenomeBrowser | scaffold793.1:6415..18195 |
| Genes list of scaffold | scaffold793.1 |
| Synonym | pfu_aug2.0_2736.1_22177 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_793.1_00493.t1 | 1 | 1 | NACHT | 265 | 432 | 2.8e-09 | 36.8 | 5.7e-13 | 8.5e-09 | 35.2 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| trochophore | 1 |
| >Adult tissues | |
| adductorMuscle | 1 |
| pearlSac | 1 |
Transcript
| Transcript ID | pfu_aug1.0_793.1_00493.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_793.1_00493.t1 atggagatcaatcagggacggcgttatatggtcatgctttttcgaacgcgtcatcagtctcgcagcagtgttttgtactc tttgcaatttgttgattgcaccacttgacgacagaataaatcgcccaaacagggtgctctggaattagtgaacaagacag tagcgttaattacccgaaacctgcatgtctggtccatgctgcaaatttatctgttcttaaatgatgctatcaatttgaag acagaacacttgaaacacttgaaaatcagtaaccttgaggaacaactgttaaaggacagcaacaaaacgattaaagatat agaaggaatgaccaaagacctgacacaaataaaagaaagtatggagcaaattatgcaattaaagggaagttttgataata tattgcaaagagtgactatgcttgaagcacagatgaaagtgaatcacgaagaaatggtccaaagtttgatgcagttgaaa gggagtaaggaaaccactgataagtcatctcagacaacacaaatgttcaagagaaatgaagttgaggaacctaatctcaa gaagctaaaacagagtatgaaagaaatcaacgacaatataacaagagtagtcccactgtcccctctgcaggagcgtggag aagacgaattacccatagagctgctatatagcgaactggtgatccatgaagattccaaatatagagaaaagcgacatgat ggttcactttccagtgacgaacaaactgaccaagctaatattttcattaagaatggtaaattagtccggaaactatacat atcaggtgacgcagcacacggcaaatcgacatactgtttatggctagtaaagaattggtgcaatgctcaactagaggatg gtttaggaagacagactaaacagttagaaacagctctgagtgaattcaactttgtttttctgatacaattccgttatgtg aatccaaatagagcgtctgtaaaagacatgatatgcaatgatgtatacgggagctacgaggactgccatgacgccatacg ttacgtattatcatctgacaaatacagaagtctcataatcatggacggccttgacgagtggaatccaaatcaagaaacca gaaaacttcttacttgtcaaggaatgccaaatattgacgtttcaagtacggttacatgtttaatttcaatgcgaccatgg gtacttgcaaccatcataaagactgtgaagataagtgacaaagtagtagaaattcgtggttttcgaacaactgacaggga aagagtaattgaaaatgtacttttatatcgctatagactgaaggaacattcttcagaatacagagatgcatattctagag ttgtagaaaagatggttgatagttgtgtacaatcattcatgcaaattcctttgttagctgtagtttgtgtacaggtatta tacgaggggaaacggctaggggacactatgaccagtttttatgctgagatgttagatatgttaatagagagagcttatca gaaacataatcttcaaatagaacatggcagtactgttcacagtaaattaactgaaattttttctcaacatgaaaacatta aacattgcagttctgttctgttaaagttgggaaaagtagcatatgaaggtttcatatctaataaggcaaacttagtattt cagaaaagagaattagaagaaatattggatgagacagaaatacagtttgcactagatgttgggttgatcagtcagaatga agcacgcagccttttaacaaagaatgtaagtgtccatttctttcatcagtctattcaggaattcctggctgcaatcaaca ttgtaactagtaaagaagtttgtgattcattctgtaaacatctgtcaaatgtctttgacgtcatgcattattctaatgtt atcatgttcatatgtggtatgtgttcgtcctttggtagagaaatatcacaccgcatttcaagtctaatggatattgacca agagatctgtaaataccgagaatcacccggtgtaaacatgcaagtaagagaactgtacaaacttcaagtacaatggtaca aagaggtgaatttcaggcaattacgggaaaaccaagtgacagataggtcagaggcaagtagtcaagtgacaaccacacca gatactttccatgtatctgatgtccatttggatgatgctagtgacgcagaaacaattggggtgactagggaactcctgtt tgatgaatgtgtagggataagctcattagtgttacattgggtacctactgacaaagatcttggcatcacaaacaaagacc ttaataactacctggttaaccatcacaacaatacaaggtcactaactgcggtctacatcgacggtcagtccactgttagt atgtcggcagcagattgggacaaattgattgaatcatttttacacatcttgcacagtttcgatgttcatctatcggcaac aaatattgatgaggaagccataaccaaaatcaagtcctctcctagcttcaaaacaagtcaggataaaaatcatatacgaa tcgcaagagtatcgcccgatgaaaacctagaaggaagagaaacccatgacagcgacaattctgaaaccaatgatatggtt cttccacataaagaagtagaagatggtgaaatatccactgaaagcgatgacacatataacaatgaaggagacaattatca tcgtactcgccatcatcatcatcatcatcatcatcatcatcatcatcatcatcaccaccaccatcatcatcatcatcatc atcatcatcatggtaatgaaagggataattttcatcgacattatcatttgcatcatcgtcataacaattatcgctacgaa catcaacattatcatcaccattgttatcataatcaacatcaatatcatgatcattttcatcatcattatcatcctcgtcg tattcataatcagcaacgtcctaatcattag |
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Protein
| Protein ID | pfu_aug1.0_793.1_00493.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_793.1_00493.t1 MEINQGRRYMVMLFRTRHQSRSSVLYSLQFVDCTTXRQNKSPKQGALELVNKTVALITRNLHVWSMLQIYLFLNDAINLK TEHLKHLKISNLEEQLLKDSNKTIKDIEGMTKDLTQIKESMEQIMQLKGSFDNILQRVTMLEAQMKVNHEEMVQSLMQLK GSKETTDKSSQTTQMFKRNEVEEPNLKKLKQSMKEINDNITRVVPLSPLQERGEDELPIELLYSELVIHEDSKYREKRHD GSLSSDEQTDQANIFIKNGKLVRKLYISGDAAHGKSTYCLWLVKNWCNAQLEDGLGRQTKQLETALSEFNFVFLIQFRYV NPNRASVKDMICNDVYGSYEDCHDAIRYVLSSDKYRSLIIMDGLDEWNPNQETRKLLTCQGMPNIDVSSTVTCLISMRPW VLATIIKTVKISDKVVEIRGFRTTDRERVIENVLLYRYRLKEHSSEYRDAYSRVVEKMVDSCVQSFMQIPLLAVVCVQVL YEGKRLGDTMTSFYAEMLDMLIERAYQKHNLQIEHGSTVHSKLTEIFSQHENIKHCSSVLLKLGKVAYEGFISNKANLVF QKRELEEILDETEIQFALDVGLISQNEARSLLTKNVSVHFFHQSIQEFLAAINIVTSKEVCDSFCKHLSNVFDVMHYSNV IMFICGMCSSFGREISHRISSLMDIDQEICKYRESPGVNMQVRELYKLQVQWYKEVNFRQLRENQVTDRSEASSQVTTTP DTFHVSDVHLDDASDAETIGVTRELLFDECVGISSLVLHWVPTDKDLGITNKDLNNYLVNHHNNTRSLTAVYIDGQSTVS MSAADWDKLIESFLHILHSFDVHLSATNIDEEAITKIKSSPSFKTSQDKNHIRIARVSPDENLEGRETHDSDNSETNDMV LPHKEVEDGEISTESDDTYNNEGDNYHRTRHHHHHHHHHHHHHHHHHHHHHHHHHHHGNERDNFHRHYHLHHRHNNYRYE HQHYHHHCYHNQHQYHDHFHHHYHPRRIHNQQRPNH |
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