Gene
| Gene Model ID | pfu_aug1.0_7934.1_45766 |
|---|---|
| Locus | scaffold7934.1 : 15870 ... 28895 : - |
| To GenomeBrowser | scaffold7934.1:15870..28895 |
| Genes list of scaffold | scaffold7934.1 |
| Synonym | pfu_aug2.0_1531.1_05107 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_7934.1_45766.t1 | 2 | 1 | LRAT | 47 | 175 | 3.4e-23 | 81.9 | 1.8e-18 | 9.1e-15 | 54.7 |
| pfu_aug1.0_7934.1_45766.t1 | 2 | 2 | LRAT | 238 | 352 | 3.4e-23 | 81.9 | 1.0e-10 | 5.2e-07 | 29.6 |
Transcript
| Transcript ID | pfu_aug1.0_7934.1_45766.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_7934.1_45766.t1 atggaccagacatgcaggtttattgataacaggagcatcgccgtgcctcatttaatatgtgttacgacttctaccagttt ctttagttttgattttatgctcatgatgtaatgcgtaaaagctattcctgtacggaacaggaaagacgtaaaagttgggg atcatatcattaattctggtattctatatgatcatcatgccattgttattgacatactacctgatgaaaaagatgaagac aatcataaaaaggcaagaagtaagcttatccattcaacaaacagtatatgtggggcgtttgctggactgtttaaattatt tggcggcaaagcaaaaatacttcaaacttctgaatgttttgatttcgaaaggtgtaaaataatggtcgtgaagtatatac gatccccgtttggacccagcgaagtagtgcgccgagcaaagaaaaaacatcaggataaagacttcaaataccacgttttc agaaataattgcgaacattttgctacttattgtgtcacaggtgagcgattcagcgtccagattaacaaactcattcttgc tatgagaatgctgttacctctgtggcttaaaggtctcttagacgaaaagtttagaaacaagctggcttatgaaagaggta tgatatgcaaaccttgttttaaaaggaatgagtggcttttcgcggcaaagaaaaagcccattaacgcactgagcgaagtt aagaaaggcgatctaattacttttccgtattggtattttgaccacaatgccatagtcatggaaacacacgcagaaggacc tcagaaccgacataaaaaagttggtctgacaattgcccattatgcattctgtggaccttttcagcaccacacaataatcc tagaaaggagatcgttcaatctagatggatcagtgacagtgacaatgtacgaaagccctgaatacaatgtcttcagtcca gatgaaacggttgaaagggccaagaaacgaataaatgaacaacaatatacctattttgcaaataactctagtcatttcgc acgttggtgtaaacttaaacgaaccaaatcaatctctttatcccagtatcggctaggtgacagccagtctgaaactgaaa taaattga |
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Protein
| Protein ID | pfu_aug1.0_7934.1_45766.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_7934.1_45766.t1 MDQTCRFIDNRSIAVPHLICVTTSTSFFSFDFMLMMXCVKAIPVRNRKDVKVGDHIINSGILYDHHAIVIDILPDEKDED NHKKARSKLIHSTNSICGAFAGLFKLFGGKAKILQTSECFDFERCKIMVVKYIRSPFGPSEVVRRAKKKHQDKDFKYHVF RNNCEHFATYCVTGERFSVQINKLILAMRMLLPLWLKGLLDEKFRNKLAYERGMICKPCFKRNEWLFAAKKKPINALSEV KKGDLITFPYWYFDHNAIVMETHAEGPQNRHKKVGLTIAHYAFCGPFQHHTIILERRSFNLDGSVTVTMYESPEYNVFSP DETVERAKKRINEQQYTYFANNSSHFARWCKLKRTKSISLSQYRLGDSQSETEIN |
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